RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	KRTAP15-1	Q3LI76	137 aa		6.52	□□□□□ -1.36
RBFOX1-222	ENST00000585867	MT1E	P04732	61 aa		6.51	□□□□□ -1.37
RBFOX1-222	ENST00000585867	LCE1A	Q5T7P2	110 aa		6.51	□□□□□ -1.37
RBFOX1-222	ENST00000585867	MDN1	Q9NU22	5596 aa		6.44	□□□□□ -1.38
RBFOX1-222	ENST00000585867	NEB	P20929	6669 aa		6.44	□□□□□ -1.38
RBFOX1-222	ENST00000585867	KRTAP19-4	Q3LI73	84 aa		6.38	□□□□□ -1.39
RBFOX1-222	ENST00000585867	KRTAP19-3	Q7Z4W3	81 aa		6.36	□□□□□ -1.39
RBFOX1-222	ENST00000585867	MT1L	Q93083	61 aa		6.32	□□□□□ -1.4
RBFOX1-222	ENST00000585867	SPRR2D	P22532	72 aa		6.31	□□□□□ -1.4
RBFOX1-222	ENST00000585867	LCE5A	Q5TCM9	118 aa		6.31	□□□□□ -1.4
RBFOX1-222	ENST00000585867	MT1G	P13640	62 aa		6.28	□□□□□ -1.4
RBFOX1-222	ENST00000585867	LCE3C	Q5T5A8	94 aa		6.23	□□□□□ -1.41
RBFOX1-222	ENST00000585867	KRTAP20-1	Q3LI63	56 aa		6.19	□□□□□ -1.42
RBFOX1-222	ENST00000585867	KRTAP2-3	P0C7H8	128 aa		6.17	□□□□□ -1.42
RBFOX1-222	ENST00000585867	MT1M	Q8N339	61 aa		6.17	□□□□□ -1.42
RBFOX1-222	ENST00000585867	KRTAP2-4	Q9BYR9	128 aa		6.17	□□□□□ -1.42
RBFOX1-222	ENST00000585867	SPRR5	A0A1B0GTR4	108 aa		6.15	□□□□□ -1.42
RBFOX1-222	ENST00000585867	LCE3B	Q5TA77	95 aa		6.1	□□□□□ -1.43
RBFOX1-222	ENST00000585867	KRTAP4-7	Q9BYR0	210 aa		6.06	□□□□□ -1.44
RBFOX1-222	ENST00000585867	KRTAP4-3	Q9BYR4	195 aa		6.03	□□□□□ -1.44
RBFOX1-222	ENST00000585867	KRTAP2-2	Q9BYT5	123 aa		6.01	□□□□□ -1.45
RBFOX1-222	ENST00000585867	KRTAP2-1	Q9BYU5	128 aa		6.01	□□□□□ -1.45
RBFOX1-222	ENST00000585867	LUZP6	Q538Z0	58 aa		5.99	□□□□□ -1.45
RBFOX1-222	ENST00000585867	DST	Q03001	7570 aa	Known RBP	5.94	□□□□□ -1.46
RBFOX1-222	ENST00000585867	KRTAP9-6	A8MVA2	160 aa		5.8	□□□□□ -1.48
RBFOX1-222	ENST00000585867	LOC100996750	A0A140TA64	210 aa		5.71	□□□□□ -1.5
RBFOX1-222	ENST00000585867	NDUFAF8	A1L188	74 aa		5.69	□□□□□ -1.5
RBFOX1-222	ENST00000585867	LCE4A	Q5TA78	99 aa		5.6	□□□□□ -1.51
RBFOX1-222	ENST00000585867	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.59	□□□□□ -1.51
RBFOX1-222	ENST00000585867	KRTAP5-4	Q6L8H1	288 aa		5.58	□□□□□ -1.52
RBFOX1-222	ENST00000585867	KRTAP4-9	Q9BYQ8	210 aa		5.55	□□□□□ -1.52
RBFOX1-222	ENST00000585867	MT4	P47944	62 aa		5.49	□□□□□ -1.53
RBFOX1-222	ENST00000585867	KRTAP4-6	Q9BYQ5	205 aa		5.48	□□□□□ -1.53
RBFOX1-222	ENST00000585867	LCE1D	Q5T752	114 aa		5.47	□□□□□ -1.53
RBFOX1-222	ENST00000585867	MT1A	P04731	61 aa		5.41	□□□□□ -1.54
RBFOX1-222	ENST00000585867	KRTAP12-4	P60329	112 aa		5.34	□□□□□ -1.55
RBFOX1-222	ENST00000585867	KRTAP6-1	Q3LI64	71 aa		5.33	□□□□□ -1.56
RBFOX1-222	ENST00000585867	SYNE1	Q8NF91	8797 aa	Known RBP	5.32	□□□□□ -1.56
RBFOX1-222	ENST00000585867	HMCN1	Q96RW7	5635 aa		5.27	□□□□□ -1.57
RBFOX1-222	ENST00000585867	KRTAP20-2	Q3LI61	65 aa		5.25	□□□□□ -1.57
RBFOX1-222	ENST00000585867	KRTAP9-4	Q9BYQ2	154 aa		5.16	□□□□□ -1.58
RBFOX1-222	ENST00000585867		A0A0A0MQY5	61 aa		5.08	□□□□□ -1.6
RBFOX1-222	ENST00000585867	KRTAP5-3	Q6L8H2	238 aa		5.07	□□□□□ -1.6
RBFOX1-222	ENST00000585867		H3BS24	57 aa		5.06	□□□□□ -1.6
RBFOX1-222	ENST00000585867	KRTAP6-2	Q3LI66	62 aa		4.99	□□□□□ -1.61
RBFOX1-222	ENST00000585867	KRTAP5-2	Q701N4	177 aa		4.97	□□□□□ -1.61
RBFOX1-222	ENST00000585867	MT3	P25713	68 aa		4.91	□□□□□ -1.62
RBFOX1-222	ENST00000585867	AHNAK2	Q8IVF2	5795 aa		4.85	□□□□□ -1.63
RBFOX1-222	ENST00000585867	KRTAP5-10	Q6L8G5	202 aa		4.81	□□□□□ -1.64
RBFOX1-222	ENST00000585867	INE1	O15225	51 aa		4.78	□□□□□ -1.64
RBFOX1-222	ENST00000585867	GPR98	Q8WXG9	6306 aa		4.76	□□□□□ -1.65
RBFOX1-222	ENST00000585867	KRTAP4-12	Q9BQ66	201 aa		4.74	□□□□□ -1.65
RBFOX1-222	ENST00000585867	KRTAP9-9	Q9BYP9	154 aa		4.68	□□□□□ -1.66
RBFOX1-222	ENST00000585867	LCE3D	Q9BYE3	92 aa		4.67	□□□□□ -1.66
RBFOX1-222	ENST00000585867	KRTAP4-11	Q9BYQ6	195 aa		4.66	□□□□□ -1.66
RBFOX1-222	ENST00000585867	OBSCN	Q5VST9	7968 aa		4.58	□□□□□ -1.68
RBFOX1-222	ENST00000585867	KRTAP5-7	Q6L8G8	165 aa		4.55	□□□□□ -1.68
RBFOX1-222	ENST00000585867	LCE3E	Q5T5B0	92 aa		4.54	□□□□□ -1.68
RBFOX1-222	ENST00000585867	KRTAP5-8	O75690	187 aa		4.5	□□□□□ -1.69
RBFOX1-222	ENST00000585867	KRTAP5-1	Q6L8H4	278 aa		4.37	□□□□□ -1.71
RBFOX1-222	ENST00000585867	LCE1E	Q5T753	118 aa		4.36	□□□□□ -1.71
RBFOX1-222	ENST00000585867	KRTAP4-2	Q9BYR5	136 aa		4.27	□□□□□ -1.73
RBFOX1-222	ENST00000585867	MUC5AC	P98088	5654 aa		4.14	□□□□□ -1.75
RBFOX1-222	ENST00000585867	LCE1B	Q5T7P3	118 aa		4.1	□□□□□ -1.75
RBFOX1-222	ENST00000585867	LCE1C	Q5T751	118 aa		4.06	□□□□□ -1.76
RBFOX1-222	ENST00000585867	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.92	□□□□□ -1.78
RBFOX1-222	ENST00000585867	PRM1	P04553	51 aa		3.89	□□□□□ -1.79
RBFOX1-222	ENST00000585867	AHNAK	Q09666	5890 aa	Known RBP	3.81	□□□□□ -1.8
RBFOX1-222	ENST00000585867	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.74	□□□□□ -1.81
RBFOX1-222	ENST00000585867	KRTAP5-11	Q6L8G4	156 aa		3.62	□□□□□ -1.83
RBFOX1-222	ENST00000585867	KRTAP21-2	Q3LI59	83 aa		3.5	□□□□□ -1.85
RBFOX1-222	ENST00000585867	LCE1F	Q5T754	118 aa		3.41	□□□□□ -1.86
RBFOX1-222	ENST00000585867	KRTAP4-4	Q9BYR3	166 aa		3.15	□□□□□ -1.91
RBFOX1-222	ENST00000585867	PHGR1	C9JFL3	82 aa		3.12	□□□□□ -1.91
RBFOX1-222	ENST00000585867	MUC19	Q7Z5P9	8384 aa		2.77	□□□□□ -1.97
RBFOX1-222	ENST00000585867	KRTAP21-1	Q3LI58	79 aa		2.37	□□□□□ -2.03
RBFOX1-222	ENST00000585867	MUC16	Q8WXI7	14507 aa		2.01	□□□□□ -2.09

Retrieved 77 of 20,778 RNA–protein pairs in 102.3 ms