RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
SPC24-202ENST00000585486 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
SPC24-202ENST00000585486 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
SPC24-202ENST00000585486 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
SPC24-202ENST00000585486 NEBP20929 6669 aa4.74□□□□□ -1.65
SPC24-202ENST00000585486 SPRR2EP22531 72 aa4.7□□□□□ -1.66
SPC24-202ENST00000585486 SPRR2BP35325 72 aa4.7□□□□□ -1.66
SPC24-202ENST00000585486 SPRR2AP35326 72 aa4.7□□□□□ -1.66
SPC24-202ENST00000585486 MT1GP13640 62 aa4.69□□□□□ -1.66
SPC24-202ENST00000585486 MT1MQ8N339 61 aa4.65□□□□□ -1.67
SPC24-202ENST00000585486 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
SPC24-202ENST00000585486 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SPC24-202ENST00000585486 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
SPC24-202ENST00000585486 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
SPC24-202ENST00000585486 H3BS24 57 aa4.57□□□□□ -1.68
SPC24-202ENST00000585486 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
SPC24-202ENST00000585486 SPRR2DP22532 72 aa4.53□□□□□ -1.68
SPC24-202ENST00000585486 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
SPC24-202ENST00000585486 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
SPC24-202ENST00000585486 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.7
SPC24-202ENST00000585486 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
SPC24-202ENST00000585486 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
SPC24-202ENST00000585486 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
SPC24-202ENST00000585486 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
SPC24-202ENST00000585486 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
SPC24-202ENST00000585486 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
SPC24-202ENST00000585486 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
SPC24-202ENST00000585486 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
SPC24-202ENST00000585486 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
SPC24-202ENST00000585486 MT1AP04731 61 aa4.07□□□□□ -1.76
SPC24-202ENST00000585486 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
SPC24-202ENST00000585486 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
SPC24-202ENST00000585486 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
SPC24-202ENST00000585486 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
SPC24-202ENST00000585486 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
SPC24-202ENST00000585486 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
SPC24-202ENST00000585486 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
SPC24-202ENST00000585486 MT4P47944 62 aa3.93□□□□□ -1.78
SPC24-202ENST00000585486 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
SPC24-202ENST00000585486 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
SPC24-202ENST00000585486 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
SPC24-202ENST00000585486 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
SPC24-202ENST00000585486 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
SPC24-202ENST00000585486 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
SPC24-202ENST00000585486 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
SPC24-202ENST00000585486 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
SPC24-202ENST00000585486 MT3P25713 68 aa3.66□□□□□ -1.82
SPC24-202ENST00000585486 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
SPC24-202ENST00000585486 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
SPC24-202ENST00000585486 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SPC24-202ENST00000585486 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
SPC24-202ENST00000585486 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
SPC24-202ENST00000585486 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
SPC24-202ENST00000585486 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
SPC24-202ENST00000585486 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
SPC24-202ENST00000585486 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SPC24-202ENST00000585486 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
SPC24-202ENST00000585486 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SPC24-202ENST00000585486 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SPC24-202ENST00000585486 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
SPC24-202ENST00000585486 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
SPC24-202ENST00000585486 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
SPC24-202ENST00000585486 INE1O15225 51 aa3.12□□□□□ -1.91
SPC24-202ENST00000585486 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
SPC24-202ENST00000585486 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SPC24-202ENST00000585486 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SPC24-202ENST00000585486 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SPC24-202ENST00000585486 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SPC24-202ENST00000585486 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
SPC24-202ENST00000585486 PRM1P04553 51 aa2.75□□□□□ -1.97
SPC24-202ENST00000585486 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
SPC24-202ENST00000585486 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SPC24-202ENST00000585486 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
SPC24-202ENST00000585486 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
SPC24-202ENST00000585486 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
SPC24-202ENST00000585486 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SPC24-202ENST00000585486 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SPC24-202ENST00000585486 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 100.3 ms