RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
GCDH-203ENST00000585420 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
GCDH-203ENST00000585420 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
GCDH-203ENST00000585420 KRTAP20-1Q3LI63 56 aa6.23□□□□□ -1.41
GCDH-203ENST00000585420 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
GCDH-203ENST00000585420 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
GCDH-203ENST00000585420 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
GCDH-203ENST00000585420 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
GCDH-203ENST00000585420 SPRR2DP22532 72 aa6.14□□□□□ -1.43
GCDH-203ENST00000585420 MT1EP04732 61 aa6.13□□□□□ -1.43
GCDH-203ENST00000585420 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
GCDH-203ENST00000585420 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
GCDH-203ENST00000585420 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
GCDH-203ENST00000585420 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
GCDH-203ENST00000585420 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
GCDH-203ENST00000585420 LCE3BQ5TA77 95 aa5.96□□□□□ -1.45
GCDH-203ENST00000585420 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.45
GCDH-203ENST00000585420 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.45
GCDH-203ENST00000585420 MT1LQ93083 61 aa5.94□□□□□ -1.46
GCDH-203ENST00000585420 DSTQ03001 7570 aaKnown RBP5.92□□□□□ -1.46
GCDH-203ENST00000585420 MT1GP13640 62 aa5.91□□□□□ -1.46
GCDH-203ENST00000585420 MT1MQ8N339 61 aa5.82□□□□□ -1.48
GCDH-203ENST00000585420 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
GCDH-203ENST00000585420 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
GCDH-203ENST00000585420 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
GCDH-203ENST00000585420 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
GCDH-203ENST00000585420 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.49
GCDH-203ENST00000585420 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.49
GCDH-203ENST00000585420 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
GCDH-203ENST00000585420 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
GCDH-203ENST00000585420 LCE1DQ5T752 114 aa5.4□□□□□ -1.55
GCDH-203ENST00000585420 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.55
GCDH-203ENST00000585420 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
GCDH-203ENST00000585420 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
GCDH-203ENST00000585420 MT4P47944 62 aa5.38□□□□□ -1.55
GCDH-203ENST00000585420 HMCN1Q96RW7 5635 aa5.36□□□□□ -1.55
GCDH-203ENST00000585420 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
GCDH-203ENST00000585420 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
GCDH-203ENST00000585420 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
GCDH-203ENST00000585420 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
GCDH-203ENST00000585420 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.6
GCDH-203ENST00000585420 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
GCDH-203ENST00000585420 MT1AP04731 61 aa5.04□□□□□ -1.6
GCDH-203ENST00000585420 INE1O15225 51 aa5.03□□□□□ -1.6
GCDH-203ENST00000585420 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
GCDH-203ENST00000585420 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
GCDH-203ENST00000585420 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
GCDH-203ENST00000585420 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
GCDH-203ENST00000585420 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
GCDH-203ENST00000585420 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
GCDH-203ENST00000585420 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
GCDH-203ENST00000585420 KRTAP5-7Q6L8G8 165 aa4.63□□□□□ -1.67
GCDH-203ENST00000585420 MT3P25713 68 aa4.6□□□□□ -1.67
GCDH-203ENST00000585420 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
GCDH-203ENST00000585420 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
GCDH-203ENST00000585420 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
GCDH-203ENST00000585420 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
GCDH-203ENST00000585420 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
GCDH-203ENST00000585420 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
GCDH-203ENST00000585420 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
GCDH-203ENST00000585420 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
GCDH-203ENST00000585420 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
GCDH-203ENST00000585420 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
GCDH-203ENST00000585420 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
GCDH-203ENST00000585420 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.78
GCDH-203ENST00000585420 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
GCDH-203ENST00000585420 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
GCDH-203ENST00000585420 PRM1P04553 51 aa3.6□□□□□ -1.83
GCDH-203ENST00000585420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.85
GCDH-203ENST00000585420 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
GCDH-203ENST00000585420 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
GCDH-203ENST00000585420 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
GCDH-203ENST00000585420 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
GCDH-203ENST00000585420 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
GCDH-203ENST00000585420 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
GCDH-203ENST00000585420 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
GCDH-203ENST00000585420 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
GCDH-203ENST00000585420 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 131.9 ms