RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
PRKCSH-201ENST00000585325 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
PRKCSH-201ENST00000585325 TNP1P09430 55 aa4.77□□□□□ -1.65
PRKCSH-201ENST00000585325 MT1MQ8N339 61 aa4.77□□□□□ -1.65
PRKCSH-201ENST00000585325 MT1LQ93083 61 aa4.75□□□□□ -1.65
PRKCSH-201ENST00000585325 UQCR11O14957 56 aa4.73□□□□□ -1.65
PRKCSH-201ENST00000585325 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
PRKCSH-201ENST00000585325 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
PRKCSH-201ENST00000585325 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
PRKCSH-201ENST00000585325 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
PRKCSH-201ENST00000585325 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
PRKCSH-201ENST00000585325 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
PRKCSH-201ENST00000585325 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
PRKCSH-201ENST00000585325 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
PRKCSH-201ENST00000585325 K7ERS5 55 aa4.6□□□□□ -1.67
PRKCSH-201ENST00000585325 V9GYY9 64 aa4.59□□□□□ -1.67
PRKCSH-201ENST00000585325 PSPHP1O15172 72 aa4.57□□□□□ -1.68
PRKCSH-201ENST00000585325 PCP4P48539 62 aa4.56□□□□□ -1.68
PRKCSH-201ENST00000585325 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
PRKCSH-201ENST00000585325 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
PRKCSH-201ENST00000585325 Q1T7F1 81 aa4.49□□□□□ -1.69
PRKCSH-201ENST00000585325 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
PRKCSH-201ENST00000585325 A6NED7 52 aa4.44□□□□□ -1.7
PRKCSH-201ENST00000585325 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
PRKCSH-201ENST00000585325 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
PRKCSH-201ENST00000585325 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
PRKCSH-201ENST00000585325 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
PRKCSH-201ENST00000585325 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
PRKCSH-201ENST00000585325 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
PRKCSH-201ENST00000585325 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
PRKCSH-201ENST00000585325 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
PRKCSH-201ENST00000585325 ROMO1P60602 79 aa4.23□□□□□ -1.73
PRKCSH-201ENST00000585325 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
PRKCSH-201ENST00000585325 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
PRKCSH-201ENST00000585325 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
PRKCSH-201ENST00000585325 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
PRKCSH-201ENST00000585325 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
PRKCSH-201ENST00000585325 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
PRKCSH-201ENST00000585325 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
PRKCSH-201ENST00000585325 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
PRKCSH-201ENST00000585325 MT1AP04731 61 aa4.04□□□□□ -1.76
PRKCSH-201ENST00000585325 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
PRKCSH-201ENST00000585325 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
PRKCSH-201ENST00000585325 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
PRKCSH-201ENST00000585325 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
PRKCSH-201ENST00000585325 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
PRKCSH-201ENST00000585325 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
PRKCSH-201ENST00000585325 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PRKCSH-201ENST00000585325 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
PRKCSH-201ENST00000585325 MT3P25713 68 aa3.71□□□□□ -1.82
PRKCSH-201ENST00000585325 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
PRKCSH-201ENST00000585325 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
PRKCSH-201ENST00000585325 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
PRKCSH-201ENST00000585325 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
PRKCSH-201ENST00000585325 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
PRKCSH-201ENST00000585325 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
PRKCSH-201ENST00000585325 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
PRKCSH-201ENST00000585325 SVIPQ8NHG7 77 aa3.25□□□□□ -1.89
PRKCSH-201ENST00000585325 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
PRKCSH-201ENST00000585325 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
PRKCSH-201ENST00000585325 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
PRKCSH-201ENST00000585325 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
PRKCSH-201ENST00000585325 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
PRKCSH-201ENST00000585325 H3BS24 57 aa2.94□□□□□ -1.94
PRKCSH-201ENST00000585325 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
PRKCSH-201ENST00000585325 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
PRKCSH-201ENST00000585325 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
PRKCSH-201ENST00000585325 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
PRKCSH-201ENST00000585325 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
PRKCSH-201ENST00000585325 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
PRKCSH-201ENST00000585325 NDUFAF8A1L188 74 aa2.58□□□□□ -2
PRKCSH-201ENST00000585325 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
PRKCSH-201ENST00000585325 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
PRKCSH-201ENST00000585325 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PRKCSH-201ENST00000585325 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
PRKCSH-201ENST00000585325 PRM1P04553 51 aa2.16□□□□□ -2.06
PRKCSH-201ENST00000585325 INE1O15225 51 aa2.11□□□□□ -2.07
PRKCSH-201ENST00000585325 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 580.9 ms