RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
ERBB2-221ENST00000584888 MT1MQ8N339 61 aa6.31□□□□□ -1.4
ERBB2-221ENST00000584888 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
ERBB2-221ENST00000584888 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
ERBB2-221ENST00000584888 MT4P47944 62 aa6.24□□□□□ -1.41
ERBB2-221ENST00000584888 Q1T7F1 81 aa6.23□□□□□ -1.41
ERBB2-221ENST00000584888 V9GYY9 64 aa6.22□□□□□ -1.41
ERBB2-221ENST00000584888 PSPHP1O15172 72 aa6.18□□□□□ -1.42
ERBB2-221ENST00000584888 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
ERBB2-221ENST00000584888 KRTAP12-3P60328 96 aa6.16□□□□□ -1.42
ERBB2-221ENST00000584888 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
ERBB2-221ENST00000584888 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
ERBB2-221ENST00000584888 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
ERBB2-221ENST00000584888 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
ERBB2-221ENST00000584888 K7ERS5 55 aa6.09□□□□□ -1.43
ERBB2-221ENST00000584888 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
ERBB2-221ENST00000584888 KRTAP4-7Q9BYR0 210 aa6.04□□□□□ -1.44
ERBB2-221ENST00000584888 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
ERBB2-221ENST00000584888 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
ERBB2-221ENST00000584888 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
ERBB2-221ENST00000584888 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.46
ERBB2-221ENST00000584888 A6NED7 52 aa5.94□□□□□ -1.46
ERBB2-221ENST00000584888 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
ERBB2-221ENST00000584888 PCP4P48539 62 aa5.86□□□□□ -1.47
ERBB2-221ENST00000584888 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
ERBB2-221ENST00000584888 H3BS24 57 aa5.81□□□□□ -1.48
ERBB2-221ENST00000584888 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
ERBB2-221ENST00000584888 CDC42SE1Q9NRR8 79 aa5.8□□□□□ -1.48
ERBB2-221ENST00000584888 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
ERBB2-221ENST00000584888 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
ERBB2-221ENST00000584888 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
ERBB2-221ENST00000584888 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
ERBB2-221ENST00000584888 ROMO1P60602 79 aa5.74□□□□□ -1.49
ERBB2-221ENST00000584888 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
ERBB2-221ENST00000584888 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
ERBB2-221ENST00000584888 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
ERBB2-221ENST00000584888 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
ERBB2-221ENST00000584888 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
ERBB2-221ENST00000584888 MT1AP04731 61 aa5.41□□□□□ -1.54
ERBB2-221ENST00000584888 KRTAP6-1Q3LI64 71 aa5.37□□□□□ -1.55
ERBB2-221ENST00000584888 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
ERBB2-221ENST00000584888 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
ERBB2-221ENST00000584888 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
ERBB2-221ENST00000584888 KRTAP5-8O75690 187 aa5.17□□□□□ -1.58
ERBB2-221ENST00000584888 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
ERBB2-221ENST00000584888 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
ERBB2-221ENST00000584888 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
ERBB2-221ENST00000584888 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
ERBB2-221ENST00000584888 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
ERBB2-221ENST00000584888 MT3P25713 68 aa4.93□□□□□ -1.62
ERBB2-221ENST00000584888 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
ERBB2-221ENST00000584888 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
ERBB2-221ENST00000584888 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
ERBB2-221ENST00000584888 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
ERBB2-221ENST00000584888 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
ERBB2-221ENST00000584888 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
ERBB2-221ENST00000584888 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
ERBB2-221ENST00000584888 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
ERBB2-221ENST00000584888 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
ERBB2-221ENST00000584888 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
ERBB2-221ENST00000584888 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
ERBB2-221ENST00000584888 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
ERBB2-221ENST00000584888 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
ERBB2-221ENST00000584888 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
ERBB2-221ENST00000584888 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
ERBB2-221ENST00000584888 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
ERBB2-221ENST00000584888 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
ERBB2-221ENST00000584888 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
ERBB2-221ENST00000584888 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
ERBB2-221ENST00000584888 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
ERBB2-221ENST00000584888 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
ERBB2-221ENST00000584888 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
ERBB2-221ENST00000584888 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
ERBB2-221ENST00000584888 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
ERBB2-221ENST00000584888 PRM1P04553 51 aa2.93□□□□□ -1.94
ERBB2-221ENST00000584888 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
ERBB2-221ENST00000584888 INE1O15225 51 aa2.54□□□□□ -2
ERBB2-221ENST00000584888 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 92.9 ms