RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
CSNK1D-224ENST00000584672 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
CSNK1D-224ENST00000584672 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
CSNK1D-224ENST00000584672 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
CSNK1D-224ENST00000584672 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
CSNK1D-224ENST00000584672 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
CSNK1D-224ENST00000584672 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
CSNK1D-224ENST00000584672 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
CSNK1D-224ENST00000584672 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
CSNK1D-224ENST00000584672 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
CSNK1D-224ENST00000584672 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
CSNK1D-224ENST00000584672 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
CSNK1D-224ENST00000584672 SEC61GP60059 68 aa4.59□□□□□ -1.67
CSNK1D-224ENST00000584672 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
CSNK1D-224ENST00000584672 A0A1B0GU69 56 aa4.57□□□□□ -1.68
CSNK1D-224ENST00000584672 SYNE1Q8NF91 8797 aaKnown RBP4.55□□□□□ -1.68
CSNK1D-224ENST00000584672 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
CSNK1D-224ENST00000584672 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
CSNK1D-224ENST00000584672 Q1T7F1 81 aa4.54□□□□□ -1.68
CSNK1D-224ENST00000584672 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
CSNK1D-224ENST00000584672 V9GYY9 64 aa4.54□□□□□ -1.68
CSNK1D-224ENST00000584672 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
CSNK1D-224ENST00000584672 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
CSNK1D-224ENST00000584672 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
CSNK1D-224ENST00000584672 A0A1B0GU33 70 aa4.49□□□□□ -1.69
CSNK1D-224ENST00000584672 PSPHP1O15172 72 aa4.44□□□□□ -1.7
CSNK1D-224ENST00000584672 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
CSNK1D-224ENST00000584672 TNP1P09430 55 aa4.42□□□□□ -1.7
CSNK1D-224ENST00000584672 UQCR11O14957 56 aa4.4□□□□□ -1.71
CSNK1D-224ENST00000584672 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
CSNK1D-224ENST00000584672 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
CSNK1D-224ENST00000584672 A8MU10 97 aa4.33□□□□□ -1.72
CSNK1D-224ENST00000584672 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
CSNK1D-224ENST00000584672 A6NED7 52 aa4.32□□□□□ -1.72
CSNK1D-224ENST00000584672 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
CSNK1D-224ENST00000584672 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
CSNK1D-224ENST00000584672 MT1AP04731 61 aa4.19□□□□□ -1.74
CSNK1D-224ENST00000584672 K7ERS5 55 aa4.17□□□□□ -1.74
CSNK1D-224ENST00000584672 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
CSNK1D-224ENST00000584672 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
CSNK1D-224ENST00000584672 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
CSNK1D-224ENST00000584672 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
CSNK1D-224ENST00000584672 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CSNK1D-224ENST00000584672 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
CSNK1D-224ENST00000584672 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
CSNK1D-224ENST00000584672 KRTAP19-4Q3LI73 84 aa3.97□□□□□ -1.77
CSNK1D-224ENST00000584672 ROMO1P60602 79 aa3.96□□□□□ -1.78
CSNK1D-224ENST00000584672 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
CSNK1D-224ENST00000584672 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
CSNK1D-224ENST00000584672 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
CSNK1D-224ENST00000584672 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CSNK1D-224ENST00000584672 MT3P25713 68 aa3.85□□□□□ -1.79
CSNK1D-224ENST00000584672 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
CSNK1D-224ENST00000584672 SVIPQ8NHG7 77 aa3.75□□□□□ -1.81
CSNK1D-224ENST00000584672 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
CSNK1D-224ENST00000584672 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
CSNK1D-224ENST00000584672 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
CSNK1D-224ENST00000584672 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
CSNK1D-224ENST00000584672 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
CSNK1D-224ENST00000584672 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
CSNK1D-224ENST00000584672 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
CSNK1D-224ENST00000584672 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
CSNK1D-224ENST00000584672 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CSNK1D-224ENST00000584672 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CSNK1D-224ENST00000584672 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CSNK1D-224ENST00000584672 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CSNK1D-224ENST00000584672 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
CSNK1D-224ENST00000584672 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
CSNK1D-224ENST00000584672 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
CSNK1D-224ENST00000584672 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CSNK1D-224ENST00000584672 H3BS24 57 aa2.67□□□□□ -1.98
CSNK1D-224ENST00000584672 A0A0A0MQY5 61 aa2.65□□□□□ -1.99
CSNK1D-224ENST00000584672 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
CSNK1D-224ENST00000584672 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
CSNK1D-224ENST00000584672 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CSNK1D-224ENST00000584672 INE1O15225 51 aa2.32□□□□□ -2.04
CSNK1D-224ENST00000584672 PRM1P04553 51 aa2.05□□□□□ -2.08
CSNK1D-224ENST00000584672 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms