RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 COX6B2Q6YFQ2 88 aa2.56□□□□□ -2
NF1-223ENST00000584328 MT1HP80294 61 aa2.53□□□□□ -2
NF1-223ENST00000584328 USH2AO75445 5202 aa2.46□□□□□ -2.02
NF1-223ENST00000584328 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
NF1-223ENST00000584328 CRIPTQ9P021 101 aa2.45□□□□□ -2.02
NF1-223ENST00000584328 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
NF1-223ENST00000584328 FSIP2Q5CZC0 6907 aa2.43□□□□□ -2.02
NF1-223ENST00000584328 P0C880 135 aa2.41□□□□□ -2.02
NF1-223ENST00000584328 S4R3F8 94 aa2.41□□□□□ -2.02
NF1-223ENST00000584328 SSPOA2VEC9 5147 aa2.4□□□□□ -2.02
NF1-223ENST00000584328 M0QZ58 72 aa2.4□□□□□ -2.03
NF1-223ENST00000584328 MT2AP02795 61 aa2.39□□□□□ -2.03
NF1-223ENST00000584328 M0R2T5 61 aa2.38□□□□□ -2.03
NF1-223ENST00000584328 MT1FP04733 61 aa2.37□□□□□ -2.03
NF1-223ENST00000584328 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
NF1-223ENST00000584328 A0A0D9SG42 100 aa2.36□□□□□ -2.03
NF1-223ENST00000584328 KRTAP13-4Q3LI77 160 aa2.36□□□□□ -2.03
NF1-223ENST00000584328 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
NF1-223ENST00000584328 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
NF1-223ENST00000584328 C10orf95Q9H7T3 257 aa2.3□□□□□ -2.04
NF1-223ENST00000584328 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
NF1-223ENST00000584328 FCGBPQ9Y6R7 5405 aaPredicted RBP2.29□□□□□ -2.04
NF1-223ENST00000584328 PLAC4Q8WY50 150 aa2.26□□□□□ -2.05
NF1-223ENST00000584328 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
NF1-223ENST00000584328 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
NF1-223ENST00000584328 R4GN34 69 aa2.24□□□□□ -2.05
NF1-223ENST00000584328 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
NF1-223ENST00000584328 MT1BP07438 61 aa2.22□□□□□ -2.05
NF1-223ENST00000584328 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
NF1-223ENST00000584328 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
NF1-223ENST00000584328 SYNE2Q8WXH0 6885 aaKnown RBP2.19□□□□□ -2.06
NF1-223ENST00000584328 TNP1P09430 55 aa2.12□□□□□ -2.07
NF1-223ENST00000584328 KMT2DO14686 5537 aa2.1□□□□□ -2.07
NF1-223ENST00000584328 MT1XP80297 61 aa2.1□□□□□ -2.07
NF1-223ENST00000584328 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
NF1-223ENST00000584328 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
NF1-223ENST00000584328 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
NF1-223ENST00000584328 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
NF1-223ENST00000584328 NEBP20929 6669 aa2.05□□□□□ -2.08
NF1-223ENST00000584328 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
NF1-223ENST00000584328 INE1O15225 51 aa2.03□□□□□ -2.08
NF1-223ENST00000584328 PRO2289Q9P1D8 64 aa2.03□□□□□ -2.08
NF1-223ENST00000584328 KRTAP6-3Q3LI67 103 aa2.01□□□□□ -2.09
NF1-223ENST00000584328 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
NF1-223ENST00000584328 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
NF1-223ENST00000584328 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
NF1-223ENST00000584328 MT1EP04732 61 aa1.85□□□□□ -2.11
NF1-223ENST00000584328 SPRR2EP22531 72 aa1.83□□□□□ -2.12
NF1-223ENST00000584328 SPRR2BP35325 72 aa1.83□□□□□ -2.12
NF1-223ENST00000584328 SPRR2AP35326 72 aa1.83□□□□□ -2.12
NF1-223ENST00000584328 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
NF1-223ENST00000584328 KRTAP20-1Q3LI63 56 aa1.81□□□□□ -2.12
NF1-223ENST00000584328 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
NF1-223ENST00000584328 KRTAP19-3Q7Z4W3 81 aa1.8□□□□□ -2.12
NF1-223ENST00000584328 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
NF1-223ENST00000584328 MT1LQ93083 61 aa1.78□□□□□ -2.12
NF1-223ENST00000584328 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
NF1-223ENST00000584328 MT1GP13640 62 aa1.77□□□□□ -2.13
NF1-223ENST00000584328 SPRR2DP22532 72 aa1.77□□□□□ -2.13
NF1-223ENST00000584328 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
NF1-223ENST00000584328 MT1MQ8N339 61 aa1.75□□□□□ -2.13
NF1-223ENST00000584328 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
NF1-223ENST00000584328 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
NF1-223ENST00000584328 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
NF1-223ENST00000584328 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
NF1-223ENST00000584328 MT1AP04731 61 aa1.52□□□□□ -2.17
NF1-223ENST00000584328 MT4P47944 62 aa1.52□□□□□ -2.17
NF1-223ENST00000584328 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
NF1-223ENST00000584328 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
NF1-223ENST00000584328 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
NF1-223ENST00000584328 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
NF1-223ENST00000584328 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
NF1-223ENST00000584328 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
NF1-223ENST00000584328 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
NF1-223ENST00000584328 PRM1P04553 51 aa1.3□□□□□ -2.2
NF1-223ENST00000584328 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
NF1-223ENST00000584328 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
NF1-223ENST00000584328 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 150.3 ms