RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
CCDC144NL-AS1-218ENST00000583962 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CCDC144NL-AS1-218ENST00000583962 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
CCDC144NL-AS1-218ENST00000583962 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
CCDC144NL-AS1-218ENST00000583962 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
CCDC144NL-AS1-218ENST00000583962 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
CCDC144NL-AS1-218ENST00000583962 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
CCDC144NL-AS1-218ENST00000583962 MT1XP80297 61 aa3.73□□□□□ -1.81
CCDC144NL-AS1-218ENST00000583962 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.81
CCDC144NL-AS1-218ENST00000583962 KMT2DO14686 5537 aa3.69□□□□□ -1.82
CCDC144NL-AS1-218ENST00000583962 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
CCDC144NL-AS1-218ENST00000583962 KRTAP5-9P26371 169 aa3.65□□□□□ -1.82
CCDC144NL-AS1-218ENST00000583962 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 NEBP20929 6669 aa3.62□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 PRM1P04553 51 aa3.62□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 SPRR2EP22531 72 aa3.59□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 SPRR2BP35325 72 aa3.59□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 SPRR2AP35326 72 aa3.59□□□□□ -1.83
CCDC144NL-AS1-218ENST00000583962 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
CCDC144NL-AS1-218ENST00000583962 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
CCDC144NL-AS1-218ENST00000583962 MUC12Q9UKN1 5478 aa3.54□□□□□ -1.84
CCDC144NL-AS1-218ENST00000583962 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CCDC144NL-AS1-218ENST00000583962 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
CCDC144NL-AS1-218ENST00000583962 SPRR2DP22532 72 aa3.47□□□□□ -1.85
CCDC144NL-AS1-218ENST00000583962 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
CCDC144NL-AS1-218ENST00000583962 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
CCDC144NL-AS1-218ENST00000583962 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
CCDC144NL-AS1-218ENST00000583962 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
CCDC144NL-AS1-218ENST00000583962 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
CCDC144NL-AS1-218ENST00000583962 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
CCDC144NL-AS1-218ENST00000583962 MT1GP13640 62 aa3.31□□□□□ -1.88
CCDC144NL-AS1-218ENST00000583962 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
CCDC144NL-AS1-218ENST00000583962 MT1EP04732 61 aa3.29□□□□□ -1.88
CCDC144NL-AS1-218ENST00000583962 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
CCDC144NL-AS1-218ENST00000583962 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
CCDC144NL-AS1-218ENST00000583962 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
CCDC144NL-AS1-218ENST00000583962 MT1LQ93083 61 aa3.27□□□□□ -1.89
CCDC144NL-AS1-218ENST00000583962 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
CCDC144NL-AS1-218ENST00000583962 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
CCDC144NL-AS1-218ENST00000583962 MT1MQ8N339 61 aa3.15□□□□□ -1.91
CCDC144NL-AS1-218ENST00000583962 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CCDC144NL-AS1-218ENST00000583962 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
CCDC144NL-AS1-218ENST00000583962 MT4P47944 62 aa3.04□□□□□ -1.92
CCDC144NL-AS1-218ENST00000583962 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
CCDC144NL-AS1-218ENST00000583962 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
CCDC144NL-AS1-218ENST00000583962 MT1AP04731 61 aa2.95□□□□□ -1.94
CCDC144NL-AS1-218ENST00000583962 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CCDC144NL-AS1-218ENST00000583962 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
CCDC144NL-AS1-218ENST00000583962 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
CCDC144NL-AS1-218ENST00000583962 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
CCDC144NL-AS1-218ENST00000583962 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
CCDC144NL-AS1-218ENST00000583962 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
CCDC144NL-AS1-218ENST00000583962 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
CCDC144NL-AS1-218ENST00000583962 MT3P25713 68 aa2.69□□□□□ -1.98
CCDC144NL-AS1-218ENST00000583962 LCE1CQ5T751 118 aa2.53□□□□□ -2
CCDC144NL-AS1-218ENST00000583962 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
CCDC144NL-AS1-218ENST00000583962 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CCDC144NL-AS1-218ENST00000583962 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
CCDC144NL-AS1-218ENST00000583962 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
CCDC144NL-AS1-218ENST00000583962 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
CCDC144NL-AS1-218ENST00000583962 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
CCDC144NL-AS1-218ENST00000583962 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
CCDC144NL-AS1-218ENST00000583962 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CCDC144NL-AS1-218ENST00000583962 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
CCDC144NL-AS1-218ENST00000583962 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
CCDC144NL-AS1-218ENST00000583962 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
CCDC144NL-AS1-218ENST00000583962 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
CCDC144NL-AS1-218ENST00000583962 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 78.6 ms