RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 A0A1B0GV90 55 aa3.08□□□□□ -1.92
SMCHD1-210ENST00000583800 ETDBQ3ZM63 59 aa3.08□□□□□ -1.92
SMCHD1-210ENST00000583800 TMEM258P61165 79 aa3.07□□□□□ -1.92
SMCHD1-210ENST00000583800 COL5A1-AS1Q5SY13 56 aa3.07□□□□□ -1.92
SMCHD1-210ENST00000583800 C20orf197Q8N268 126 aa3.07□□□□□ -1.92
SMCHD1-210ENST00000583800 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
SMCHD1-210ENST00000583800 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
SMCHD1-210ENST00000583800 F8W1H4 67 aa3.03□□□□□ -1.92
SMCHD1-210ENST00000583800 ATP5EP2Q5VTU8 51 aa3.03□□□□□ -1.92
SMCHD1-210ENST00000583800 GTF2H5Q6ZYL4 71 aa3.03□□□□□ -1.92
SMCHD1-210ENST00000583800 ROMO1P60602 79 aa3.01□□□□□ -1.93
SMCHD1-210ENST00000583800 J3QR89 54 aa2.99□□□□□ -1.93
SMCHD1-210ENST00000583800 MT-ATP8P03928 68 aa2.98□□□□□ -1.93
SMCHD1-210ENST00000583800 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SMCHD1-210ENST00000583800 DMAC1Q96GE9 116 aa2.98□□□□□ -1.93
SMCHD1-210ENST00000583800 K7ERU9 68 aa2.97□□□□□ -1.93
SMCHD1-210ENST00000583800 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
SMCHD1-210ENST00000583800 KRTAP19-7Q3SYF9 63 aa2.93□□□□□ -1.94
SMCHD1-210ENST00000583800 KRTAP19-3Q7Z4W3 81 aa2.92□□□□□ -1.94
SMCHD1-210ENST00000583800 LINC00643Q86TS7 51 aa2.92□□□□□ -1.94
SMCHD1-210ENST00000583800 MT1EP04732 61 aa2.91□□□□□ -1.94
SMCHD1-210ENST00000583800 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
SMCHD1-210ENST00000583800 Q1T7F1 81 aa2.87□□□□□ -1.95
SMCHD1-210ENST00000583800 CYSTM1Q9H1C7 97 aa2.87□□□□□ -1.95
SMCHD1-210ENST00000583800 MT4P47944 62 aa2.86□□□□□ -1.95
SMCHD1-210ENST00000583800 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
SMCHD1-210ENST00000583800 ACYP2P14621 99 aa2.85□□□□□ -1.95
SMCHD1-210ENST00000583800 KRTAP13-4Q3LI77 160 aa2.85□□□□□ -1.95
SMCHD1-210ENST00000583800 SPTSSBQ8NFR3 76 aa2.85□□□□□ -1.95
SMCHD1-210ENST00000583800 CHKB-CPT1BH3BT56 60 aa2.82□□□□□ -1.96
SMCHD1-210ENST00000583800 MT1GP13640 62 aa2.81□□□□□ -1.96
SMCHD1-210ENST00000583800 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
SMCHD1-210ENST00000583800 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
SMCHD1-210ENST00000583800 A0A0D9SG42 100 aa2.79□□□□□ -1.96
SMCHD1-210ENST00000583800 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
SMCHD1-210ENST00000583800 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
SMCHD1-210ENST00000583800 MT1MQ8N339 61 aa2.79□□□□□ -1.96
SMCHD1-210ENST00000583800 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
SMCHD1-210ENST00000583800 MT1LQ93083 61 aa2.75□□□□□ -1.97
SMCHD1-210ENST00000583800 CCDC179H3BU77 68 aa2.74□□□□□ -1.97
SMCHD1-210ENST00000583800 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
SMCHD1-210ENST00000583800 COA5Q86WW8 74 aa2.72□□□□□ -1.97
SMCHD1-210ENST00000583800 COX7CP15954 63 aa2.7□□□□□ -1.98
SMCHD1-210ENST00000583800 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SMCHD1-210ENST00000583800 SNURFQ9Y675 71 aa2.7□□□□□ -1.98
SMCHD1-210ENST00000583800 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
SMCHD1-210ENST00000583800 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
SMCHD1-210ENST00000583800 SPATA8Q6RVD6 105 aa2.69□□□□□ -1.98
SMCHD1-210ENST00000583800 C10orf95Q9H7T3 257 aa2.67□□□□□ -1.98
SMCHD1-210ENST00000583800 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
SMCHD1-210ENST00000583800 SERP1Q9Y6X1 66 aa2.66□□□□□ -1.98
SMCHD1-210ENST00000583800 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
SMCHD1-210ENST00000583800 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
SMCHD1-210ENST00000583800 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
SMCHD1-210ENST00000583800 TNP1P09430 55 aa2.58□□□□□ -2
SMCHD1-210ENST00000583800 INE1O15225 51 aa2.57□□□□□ -2
SMCHD1-210ENST00000583800 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
SMCHD1-210ENST00000583800 SERP2Q8N6R1 65 aa2.54□□□□□ -2
SMCHD1-210ENST00000583800 KRTAP12-3P60328 96 aa2.53□□□□□ -2
SMCHD1-210ENST00000583800 KRTAP12-4P60329 112 aa2.53□□□□□ -2
SMCHD1-210ENST00000583800 A0A1B0GU69 56 aa2.49□□□□□ -2.01
SMCHD1-210ENST00000583800 H7BZZ5 65 aa2.43□□□□□ -2.02
SMCHD1-210ENST00000583800 ATP5EP56381 51 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-210ENST00000583800 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-210ENST00000583800 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-210ENST00000583800 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
SMCHD1-210ENST00000583800 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
SMCHD1-210ENST00000583800 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
SMCHD1-210ENST00000583800 MT1AP04731 61 aa2.33□□□□□ -2.04
SMCHD1-210ENST00000583800 LINC01558Q9Y6Z2 57 aa2.29□□□□□ -2.04
SMCHD1-210ENST00000583800 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
SMCHD1-210ENST00000583800 UQCR11O14957 56 aa2.26□□□□□ -2.05
SMCHD1-210ENST00000583800 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
SMCHD1-210ENST00000583800 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SMCHD1-210ENST00000583800 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
SMCHD1-210ENST00000583800 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
SMCHD1-210ENST00000583800 PRM1P04553 51 aa1.03□□□□□ -2.24
SMCHD1-210ENST00000583800 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 50.8 ms