RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 MT1EP04732 61 aa3.43□□□□□ -1.86
UBBP4-201ENST00000583708 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
UBBP4-201ENST00000583708 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
UBBP4-201ENST00000583708 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
UBBP4-201ENST00000583708 MT1GP13640 62 aa3.38□□□□□ -1.87
UBBP4-201ENST00000583708 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
UBBP4-201ENST00000583708 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
UBBP4-201ENST00000583708 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
UBBP4-201ENST00000583708 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
UBBP4-201ENST00000583708 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
UBBP4-201ENST00000583708 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
UBBP4-201ENST00000583708 SPRR2DP22532 72 aa3.33□□□□□ -1.88
UBBP4-201ENST00000583708 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
UBBP4-201ENST00000583708 MT1LQ93083 61 aa3.32□□□□□ -1.88
UBBP4-201ENST00000583708 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
UBBP4-201ENST00000583708 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
UBBP4-201ENST00000583708 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
UBBP4-201ENST00000583708 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
UBBP4-201ENST00000583708 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
UBBP4-201ENST00000583708 MT1MQ8N339 61 aa3.24□□□□□ -1.89
UBBP4-201ENST00000583708 KRTAP2-2Q9BYT5 123 aa3.24□□□□□ -1.89
UBBP4-201ENST00000583708 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
UBBP4-201ENST00000583708 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
UBBP4-201ENST00000583708 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
UBBP4-201ENST00000583708 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
UBBP4-201ENST00000583708 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
UBBP4-201ENST00000583708 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
UBBP4-201ENST00000583708 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
UBBP4-201ENST00000583708 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
UBBP4-201ENST00000583708 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
UBBP4-201ENST00000583708 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
UBBP4-201ENST00000583708 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
UBBP4-201ENST00000583708 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
UBBP4-201ENST00000583708 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
UBBP4-201ENST00000583708 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
UBBP4-201ENST00000583708 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
UBBP4-201ENST00000583708 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
UBBP4-201ENST00000583708 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
UBBP4-201ENST00000583708 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
UBBP4-201ENST00000583708 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
UBBP4-201ENST00000583708 MT1AP04731 61 aa2.86□□□□□ -1.95
UBBP4-201ENST00000583708 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
UBBP4-201ENST00000583708 MT4P47944 62 aa2.84□□□□□ -1.95
UBBP4-201ENST00000583708 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
UBBP4-201ENST00000583708 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
UBBP4-201ENST00000583708 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
UBBP4-201ENST00000583708 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
UBBP4-201ENST00000583708 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
UBBP4-201ENST00000583708 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
UBBP4-201ENST00000583708 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
UBBP4-201ENST00000583708 MT3P25713 68 aa2.64□□□□□ -1.99
UBBP4-201ENST00000583708 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
UBBP4-201ENST00000583708 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
UBBP4-201ENST00000583708 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
UBBP4-201ENST00000583708 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
UBBP4-201ENST00000583708 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
UBBP4-201ENST00000583708 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
UBBP4-201ENST00000583708 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
UBBP4-201ENST00000583708 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
UBBP4-201ENST00000583708 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
UBBP4-201ENST00000583708 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
UBBP4-201ENST00000583708 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
UBBP4-201ENST00000583708 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
UBBP4-201ENST00000583708 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
UBBP4-201ENST00000583708 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
UBBP4-201ENST00000583708 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
UBBP4-201ENST00000583708 INE1O15225 51 aa2.09□□□□□ -2.07
UBBP4-201ENST00000583708 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
UBBP4-201ENST00000583708 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
UBBP4-201ENST00000583708 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
UBBP4-201ENST00000583708 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
UBBP4-201ENST00000583708 PRM1P04553 51 aa1.77□□□□□ -2.13
UBBP4-201ENST00000583708 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
UBBP4-201ENST00000583708 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
UBBP4-201ENST00000583708 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
UBBP4-201ENST00000583708 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
UBBP4-201ENST00000583708 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 84.6 ms