RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 K7ERS5 55 aa9.12□□□□□ -0.95
TSEN54-209ENST00000583454 KRTAP19-3Q7Z4W3 81 aa9.12□□□□□ -0.95
TSEN54-209ENST00000583454 LCE3AQ5TA76 89 aa9.1□□□□□ -0.95
TSEN54-209ENST00000583454 A6NED7 52 aa9.08□□□□□ -0.96
TSEN54-209ENST00000583454 KRTAP4-9Q9BYQ8 210 aa9.06□□□□□ -0.96
TSEN54-209ENST00000583454 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
TSEN54-209ENST00000583454 MT1GP13640 62 aa8.89□□□□□ -0.99
TSEN54-209ENST00000583454 MT1LQ93083 61 aa8.86□□□□□ -0.99
TSEN54-209ENST00000583454 LCE1DQ5T752 114 aa8.83□□□□□ -1
TSEN54-209ENST00000583454 HMCN1Q96RW7 5635 aa8.83□□□□□ -1
TSEN54-209ENST00000583454 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
TSEN54-209ENST00000583454 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
TSEN54-209ENST00000583454 CDC42SE1Q9NRR8 79 aa8.76□□□□□ -1.01
TSEN54-209ENST00000583454 MT1MQ8N339 61 aa8.73□□□□□ -1.01
TSEN54-209ENST00000583454 LCE4AQ5TA78 99 aa8.69□□□□□ -1.02
TSEN54-209ENST00000583454 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.02
TSEN54-209ENST00000583454 MT4P47944 62 aa8.64□□□□□ -1.03
TSEN54-209ENST00000583454 AHNAK2Q8IVF2 5795 aa8.64□□□□□ -1.03
TSEN54-209ENST00000583454 ROMO1P60602 79 aa8.6□□□□□ -1.03
TSEN54-209ENST00000583454 KRTAP4-3Q9BYR4 195 aa8.57□□□□□ -1.04
TSEN54-209ENST00000583454 KRTAP5-4Q6L8H1 288 aa8.55□□□□□ -1.04
TSEN54-209ENST00000583454 KRTAP4-6Q9BYQ5 205 aa8.42□□□□□ -1.06
TSEN54-209ENST00000583454 KRTAP4-7Q9BYR0 210 aa8.42□□□□□ -1.06
TSEN54-209ENST00000583454 KRTAP5-10Q6L8G5 202 aa8.39□□□□□ -1.07
TSEN54-209ENST00000583454 KRTAP19-4Q3LI73 84 aa8.35□□□□□ -1.07
TSEN54-209ENST00000583454 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
TSEN54-209ENST00000583454 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
TSEN54-209ENST00000583454 LCE3CQ5T5A8 94 aa8.12□□□□□ -1.11
TSEN54-209ENST00000583454 KRTAP5-3Q6L8H2 238 aa8.1□□□□□ -1.11
TSEN54-209ENST00000583454 KRTAP5-7Q6L8G8 165 aa8.09□□□□□ -1.11
TSEN54-209ENST00000583454 KRTAP5-5Q701N2 237 aaPredicted RBP8.09□□□□□ -1.11
TSEN54-209ENST00000583454 KRTAP20-2Q3LI61 65 aa8.07□□□□□ -1.12
TSEN54-209ENST00000583454 PRO0628Q9UI54 55 aa8.07□□□□□ -1.12
TSEN54-209ENST00000583454 SVIPQ8NHG7 77 aa8.03□□□□□ -1.12
TSEN54-209ENST00000583454 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
TSEN54-209ENST00000583454 LOC100996750A0A140TA64 210 aa7.96□□□□□ -1.14
TSEN54-209ENST00000583454 SYNE1Q8NF91 8797 aaKnown RBP7.93□□□□□ -1.14
TSEN54-209ENST00000583454 KRTAP12-4P60329 112 aa7.83□□□□□ -1.16
TSEN54-209ENST00000583454 PMAIP1Q13794 54 aa7.7□□□□□ -1.18
TSEN54-209ENST00000583454 KRTAP9-6A8MVA2 160 aa7.68□□□□□ -1.18
TSEN54-209ENST00000583454 MT1AP04731 61 aa7.54□□□□□ -1.2
TSEN54-209ENST00000583454 KRTAP6-1Q3LI64 71 aa7.47□□□□□ -1.21
TSEN54-209ENST00000583454 KRTAP5-2Q701N4 177 aa7.45□□□□□ -1.22
TSEN54-209ENST00000583454 KTN1-AS1Q86SY8 53 aa7.44□□□□□ -1.22
TSEN54-209ENST00000583454 KRTAP4-11Q9BYQ6 195 aa7.43□□□□□ -1.22
TSEN54-209ENST00000583454 PRAC1Q96KF2 57 aa7.34□□□□□ -1.23
TSEN54-209ENST00000583454 KRTAP9-4Q9BYQ2 154 aa7.25□□□□□ -1.25
TSEN54-209ENST00000583454 KRTAP5-8O75690 187 aa7.22□□□□□ -1.25
TSEN54-209ENST00000583454 AHNAKQ09666 5890 aaKnown RBP7.19□□□□□ -1.26
TSEN54-209ENST00000583454 MUC5BQ9HC84 5762 aaPredicted RBP7.17□□□□□ -1.26
TSEN54-209ENST00000583454 MUC5ACP98088 5654 aa7.15□□□□□ -1.27
TSEN54-209ENST00000583454 OBSCNQ5VST9 7968 aa7.1□□□□□ -1.27
TSEN54-209ENST00000583454 KRTAP6-2Q3LI66 62 aa7.09□□□□□ -1.27
TSEN54-209ENST00000583454 MT3P25713 68 aa6.88□□□□□ -1.31
TSEN54-209ENST00000583454 KRTAP9-9Q9BYP9 154 aa6.82□□□□□ -1.32
TSEN54-209ENST00000583454 KRTAP5-1Q6L8H4 278 aa6.73□□□□□ -1.33
TSEN54-209ENST00000583454 LCE1EQ5T753 118 aa6.28□□□□□ -1.4
TSEN54-209ENST00000583454 LUZP6Q538Z0 58 aa6.14□□□□□ -1.43
TSEN54-209ENST00000583454 KRTAP4-2Q9BYR5 136 aa6.02□□□□□ -1.45
TSEN54-209ENST00000583454 LCE3DQ9BYE3 92 aa5.92□□□□□ -1.46
TSEN54-209ENST00000583454 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.46
TSEN54-209ENST00000583454 LCE1CQ5T751 118 aa5.84□□□□□ -1.47
TSEN54-209ENST00000583454 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
TSEN54-209ENST00000583454 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
TSEN54-209ENST00000583454 KRTAP4-12Q9BQ66 201 aa5.52□□□□□ -1.53
TSEN54-209ENST00000583454 H3BS24 57 aa5.46□□□□□ -1.54
TSEN54-209ENST00000583454 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.34□□□□□ -1.55
TSEN54-209ENST00000583454 KRTAP5-11Q6L8G4 156 aa5.33□□□□□ -1.56
TSEN54-209ENST00000583454 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
TSEN54-209ENST00000583454 LCE1FQ5T754 118 aa5.22□□□□□ -1.57
TSEN54-209ENST00000583454 KRTAP21-2Q3LI59 83 aa4.94□□□□□ -1.62
TSEN54-209ENST00000583454 INE1O15225 51 aa4.89□□□□□ -1.63
TSEN54-209ENST00000583454 PHGR1C9JFL3 82 aa4.85□□□□□ -1.63
TSEN54-209ENST00000583454 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
TSEN54-209ENST00000583454 MUC19Q7Z5P9 8384 aa4.41□□□□□ -1.7
TSEN54-209ENST00000583454 PRM1P04553 51 aa4.4□□□□□ -1.71
TSEN54-209ENST00000583454 KRTAP21-1Q3LI58 79 aa3.68□□□□□ -1.82
TSEN54-209ENST00000583454 MUC16Q8WXI7 14507 aa3.15□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 103.9 ms