RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
ERBB2-215ENST00000583391 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
ERBB2-215ENST00000583391 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
ERBB2-215ENST00000583391 LCE5AQ5TCM9 118 aa4.66□□□□□ -1.66
ERBB2-215ENST00000583391 MT1LQ93083 61 aa4.66□□□□□ -1.66
ERBB2-215ENST00000583391 MT1GP13640 62 aa4.61□□□□□ -1.67
ERBB2-215ENST00000583391 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
ERBB2-215ENST00000583391 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
ERBB2-215ENST00000583391 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
ERBB2-215ENST00000583391 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
ERBB2-215ENST00000583391 MT1MQ8N339 61 aa4.57□□□□□ -1.68
ERBB2-215ENST00000583391 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
ERBB2-215ENST00000583391 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
ERBB2-215ENST00000583391 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
ERBB2-215ENST00000583391 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
ERBB2-215ENST00000583391 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
ERBB2-215ENST00000583391 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
ERBB2-215ENST00000583391 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
ERBB2-215ENST00000583391 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
ERBB2-215ENST00000583391 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
ERBB2-215ENST00000583391 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
ERBB2-215ENST00000583391 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
ERBB2-215ENST00000583391 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
ERBB2-215ENST00000583391 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
ERBB2-215ENST00000583391 KTN1-AS1Q86SY8 53 aa4.26□□□□□ -1.73
ERBB2-215ENST00000583391 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
ERBB2-215ENST00000583391 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
ERBB2-215ENST00000583391 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.75
ERBB2-215ENST00000583391 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
ERBB2-215ENST00000583391 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
ERBB2-215ENST00000583391 MT4P47944 62 aa4.11□□□□□ -1.75
ERBB2-215ENST00000583391 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
ERBB2-215ENST00000583391 HMCN1Q96RW7 5635 aa4.07□□□□□ -1.76
ERBB2-215ENST00000583391 MT1AP04731 61 aa3.97□□□□□ -1.77
ERBB2-215ENST00000583391 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
ERBB2-215ENST00000583391 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
ERBB2-215ENST00000583391 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
ERBB2-215ENST00000583391 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
ERBB2-215ENST00000583391 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
ERBB2-215ENST00000583391 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
ERBB2-215ENST00000583391 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
ERBB2-215ENST00000583391 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
ERBB2-215ENST00000583391 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
ERBB2-215ENST00000583391 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
ERBB2-215ENST00000583391 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
ERBB2-215ENST00000583391 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
ERBB2-215ENST00000583391 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
ERBB2-215ENST00000583391 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
ERBB2-215ENST00000583391 H3BS24 57 aa3.61□□□□□ -1.83
ERBB2-215ENST00000583391 MT3P25713 68 aa3.6□□□□□ -1.83
ERBB2-215ENST00000583391 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
ERBB2-215ENST00000583391 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
ERBB2-215ENST00000583391 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
ERBB2-215ENST00000583391 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
ERBB2-215ENST00000583391 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
ERBB2-215ENST00000583391 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
ERBB2-215ENST00000583391 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
ERBB2-215ENST00000583391 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
ERBB2-215ENST00000583391 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
ERBB2-215ENST00000583391 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
ERBB2-215ENST00000583391 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
ERBB2-215ENST00000583391 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
ERBB2-215ENST00000583391 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
ERBB2-215ENST00000583391 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
ERBB2-215ENST00000583391 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
ERBB2-215ENST00000583391 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
ERBB2-215ENST00000583391 LCE1CQ5T751 118 aa2.98□□□□□ -1.93
ERBB2-215ENST00000583391 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
ERBB2-215ENST00000583391 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
ERBB2-215ENST00000583391 INE1O15225 51 aa2.61□□□□□ -1.99
ERBB2-215ENST00000583391 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
ERBB2-215ENST00000583391 PRM1P04553 51 aa2.52□□□□□ -2.01
ERBB2-215ENST00000583391 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
ERBB2-215ENST00000583391 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
ERBB2-215ENST00000583391 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
ERBB2-215ENST00000583391 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
ERBB2-215ENST00000583391 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
ERBB2-215ENST00000583391 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms