RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 MT1GP13640 62 aa6.43□□□□□ -1.38
ERBB2-211ENST00000582648 MT1LQ93083 61 aa6.43□□□□□ -1.38
ERBB2-211ENST00000582648 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
ERBB2-211ENST00000582648 K7ERS5 55 aa6.38□□□□□ -1.39
ERBB2-211ENST00000582648 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
ERBB2-211ENST00000582648 MT1MQ8N339 61 aa6.38□□□□□ -1.39
ERBB2-211ENST00000582648 A6NED7 52 aa6.29□□□□□ -1.4
ERBB2-211ENST00000582648 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
ERBB2-211ENST00000582648 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
ERBB2-211ENST00000582648 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
ERBB2-211ENST00000582648 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
ERBB2-211ENST00000582648 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
ERBB2-211ENST00000582648 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
ERBB2-211ENST00000582648 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
ERBB2-211ENST00000582648 LCE4AQ5TA78 99 aa6.06□□□□□ -1.44
ERBB2-211ENST00000582648 MT4P47944 62 aa6.05□□□□□ -1.44
ERBB2-211ENST00000582648 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
ERBB2-211ENST00000582648 ROMO1P60602 79 aa5.97□□□□□ -1.45
ERBB2-211ENST00000582648 KRTAP5-4Q6L8H1 288 aa5.96□□□□□ -1.46
ERBB2-211ENST00000582648 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
ERBB2-211ENST00000582648 GPR98Q8WXG9 6306 aa5.94□□□□□ -1.46
ERBB2-211ENST00000582648 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
ERBB2-211ENST00000582648 KRTAP4-6Q9BYQ5 205 aa5.86□□□□□ -1.47
ERBB2-211ENST00000582648 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
ERBB2-211ENST00000582648 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
ERBB2-211ENST00000582648 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
ERBB2-211ENST00000582648 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
ERBB2-211ENST00000582648 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
ERBB2-211ENST00000582648 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
ERBB2-211ENST00000582648 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
ERBB2-211ENST00000582648 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
ERBB2-211ENST00000582648 SYNE1Q8NF91 8797 aaKnown RBP5.61□□□□□ -1.51
ERBB2-211ENST00000582648 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
ERBB2-211ENST00000582648 KRTAP5-10Q6L8G5 202 aa5.54□□□□□ -1.52
ERBB2-211ENST00000582648 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
ERBB2-211ENST00000582648 MT1AP04731 61 aa5.46□□□□□ -1.54
ERBB2-211ENST00000582648 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
ERBB2-211ENST00000582648 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
ERBB2-211ENST00000582648 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
ERBB2-211ENST00000582648 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
ERBB2-211ENST00000582648 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
ERBB2-211ENST00000582648 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
ERBB2-211ENST00000582648 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
ERBB2-211ENST00000582648 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
ERBB2-211ENST00000582648 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
ERBB2-211ENST00000582648 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
ERBB2-211ENST00000582648 MT3P25713 68 aa4.98□□□□□ -1.61
ERBB2-211ENST00000582648 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
ERBB2-211ENST00000582648 KRTAP5-8O75690 187 aa4.94□□□□□ -1.62
ERBB2-211ENST00000582648 SVIPQ8NHG7 77 aa4.93□□□□□ -1.62
ERBB2-211ENST00000582648 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
ERBB2-211ENST00000582648 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
ERBB2-211ENST00000582648 MUC5BQ9HC84 5762 aaPredicted RBP4.67□□□□□ -1.66
ERBB2-211ENST00000582648 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
ERBB2-211ENST00000582648 AHNAKQ09666 5890 aaKnown RBP4.65□□□□□ -1.67
ERBB2-211ENST00000582648 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
ERBB2-211ENST00000582648 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
ERBB2-211ENST00000582648 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
ERBB2-211ENST00000582648 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
ERBB2-211ENST00000582648 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
ERBB2-211ENST00000582648 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
ERBB2-211ENST00000582648 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
ERBB2-211ENST00000582648 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
ERBB2-211ENST00000582648 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
ERBB2-211ENST00000582648 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
ERBB2-211ENST00000582648 KRTAP5-11Q6L8G4 156 aa3.79□□□□□ -1.8
ERBB2-211ENST00000582648 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
ERBB2-211ENST00000582648 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
ERBB2-211ENST00000582648 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
ERBB2-211ENST00000582648 H3BS24 57 aa3.34□□□□□ -1.87
ERBB2-211ENST00000582648 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
ERBB2-211ENST00000582648 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
ERBB2-211ENST00000582648 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
ERBB2-211ENST00000582648 PRM1P04553 51 aa3.09□□□□□ -1.91
ERBB2-211ENST00000582648 INE1O15225 51 aa3.08□□□□□ -1.92
ERBB2-211ENST00000582648 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
ERBB2-211ENST00000582648 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
ERBB2-211ENST00000582648 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 72.3 ms