RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
CDC42EP4-208ENST00000582303 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
CDC42EP4-208ENST00000582303 TNP1P09430 55 aa5.06□□□□□ -1.6
CDC42EP4-208ENST00000582303 KRTAP5-10Q6L8G5 202 aa5.05□□□□□ -1.6
CDC42EP4-208ENST00000582303 A0A1B0GU69 56 aa5.04□□□□□ -1.6
CDC42EP4-208ENST00000582303 C10orf95Q9H7T3 257 aa5.04□□□□□ -1.6
CDC42EP4-208ENST00000582303 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
CDC42EP4-208ENST00000582303 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
CDC42EP4-208ENST00000582303 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
CDC42EP4-208ENST00000582303 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
CDC42EP4-208ENST00000582303 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
CDC42EP4-208ENST00000582303 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
CDC42EP4-208ENST00000582303 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
CDC42EP4-208ENST00000582303 A8MU10 97 aa4.91□□□□□ -1.62
CDC42EP4-208ENST00000582303 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
CDC42EP4-208ENST00000582303 CCDC179H3BU77 68 aa4.88□□□□□ -1.63
CDC42EP4-208ENST00000582303 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
CDC42EP4-208ENST00000582303 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
CDC42EP4-208ENST00000582303 PCP4P48539 62 aa4.83□□□□□ -1.64
CDC42EP4-208ENST00000582303 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
CDC42EP4-208ENST00000582303 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
CDC42EP4-208ENST00000582303 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
CDC42EP4-208ENST00000582303 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
CDC42EP4-208ENST00000582303 TMEM258P61165 79 aa4.76□□□□□ -1.65
CDC42EP4-208ENST00000582303 UQCR11O14957 56 aa4.72□□□□□ -1.65
CDC42EP4-208ENST00000582303 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
CDC42EP4-208ENST00000582303 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
CDC42EP4-208ENST00000582303 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
CDC42EP4-208ENST00000582303 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
CDC42EP4-208ENST00000582303 K7ERS5 55 aa4.58□□□□□ -1.68
CDC42EP4-208ENST00000582303 V9GYY9 64 aa4.54□□□□□ -1.68
CDC42EP4-208ENST00000582303 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
CDC42EP4-208ENST00000582303 PSPHP1O15172 72 aa4.48□□□□□ -1.69
CDC42EP4-208ENST00000582303 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
CDC42EP4-208ENST00000582303 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
CDC42EP4-208ENST00000582303 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
CDC42EP4-208ENST00000582303 Q1T7F1 81 aa4.44□□□□□ -1.7
CDC42EP4-208ENST00000582303 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
CDC42EP4-208ENST00000582303 MT1AP04731 61 aa4.39□□□□□ -1.71
CDC42EP4-208ENST00000582303 A6NED7 52 aa4.36□□□□□ -1.71
CDC42EP4-208ENST00000582303 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
CDC42EP4-208ENST00000582303 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
CDC42EP4-208ENST00000582303 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
CDC42EP4-208ENST00000582303 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
CDC42EP4-208ENST00000582303 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
CDC42EP4-208ENST00000582303 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
CDC42EP4-208ENST00000582303 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CDC42EP4-208ENST00000582303 RPS28P62857 69 aaKnown RBP4.27□□□□□ -1.73
CDC42EP4-208ENST00000582303 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
CDC42EP4-208ENST00000582303 ROMO1P60602 79 aa4.2□□□□□ -1.74
CDC42EP4-208ENST00000582303 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
CDC42EP4-208ENST00000582303 MT3P25713 68 aa4.08□□□□□ -1.76
CDC42EP4-208ENST00000582303 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
CDC42EP4-208ENST00000582303 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
CDC42EP4-208ENST00000582303 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
CDC42EP4-208ENST00000582303 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
CDC42EP4-208ENST00000582303 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
CDC42EP4-208ENST00000582303 H3BS24 57 aa3.65□□□□□ -1.83
CDC42EP4-208ENST00000582303 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
CDC42EP4-208ENST00000582303 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
CDC42EP4-208ENST00000582303 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CDC42EP4-208ENST00000582303 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
CDC42EP4-208ENST00000582303 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CDC42EP4-208ENST00000582303 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
CDC42EP4-208ENST00000582303 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CDC42EP4-208ENST00000582303 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
CDC42EP4-208ENST00000582303 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
CDC42EP4-208ENST00000582303 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CDC42EP4-208ENST00000582303 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
CDC42EP4-208ENST00000582303 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
CDC42EP4-208ENST00000582303 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
CDC42EP4-208ENST00000582303 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
CDC42EP4-208ENST00000582303 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
CDC42EP4-208ENST00000582303 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CDC42EP4-208ENST00000582303 INE1O15225 51 aa2.46□□□□□ -2.02
CDC42EP4-208ENST00000582303 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
CDC42EP4-208ENST00000582303 PRM1P04553 51 aa2.14□□□□□ -2.07
CDC42EP4-208ENST00000582303 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms