RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 A0A1B0GU69 56 aa4.93□□□□□ -1.62
CCDC57-214ENST00000582040 COX7CP15954 63 aa4.93□□□□□ -1.62
CCDC57-214ENST00000582040 H7BZZ5 65 aa4.92□□□□□ -1.62
CCDC57-214ENST00000582040 KRTAP4-7Q9BYR0 210 aa4.86□□□□□ -1.63
CCDC57-214ENST00000582040 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
CCDC57-214ENST00000582040 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
CCDC57-214ENST00000582040 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
CCDC57-214ENST00000582040 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
CCDC57-214ENST00000582040 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
CCDC57-214ENST00000582040 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
CCDC57-214ENST00000582040 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
CCDC57-214ENST00000582040 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
CCDC57-214ENST00000582040 ANAPC13Q9BS18 74 aa4.64□□□□□ -1.67
CCDC57-214ENST00000582040 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CCDC57-214ENST00000582040 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
CCDC57-214ENST00000582040 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
CCDC57-214ENST00000582040 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
CCDC57-214ENST00000582040 CCDC179H3BU77 68 aa4.56□□□□□ -1.68
CCDC57-214ENST00000582040 UQCR11O14957 56 aa4.55□□□□□ -1.68
CCDC57-214ENST00000582040 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
CCDC57-214ENST00000582040 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
CCDC57-214ENST00000582040 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
CCDC57-214ENST00000582040 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
CCDC57-214ENST00000582040 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
CCDC57-214ENST00000582040 K7ERS5 55 aa4.38□□□□□ -1.71
CCDC57-214ENST00000582040 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
CCDC57-214ENST00000582040 TMEM258P61165 79 aa4.36□□□□□ -1.71
CCDC57-214ENST00000582040 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
CCDC57-214ENST00000582040 MT1AP04731 61 aa4.34□□□□□ -1.71
CCDC57-214ENST00000582040 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
CCDC57-214ENST00000582040 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
CCDC57-214ENST00000582040 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
CCDC57-214ENST00000582040 PSPHP1O15172 72 aa4.23□□□□□ -1.73
CCDC57-214ENST00000582040 AHNAKQ09666 5890 aaKnown RBP4.2□□□□□ -1.74
CCDC57-214ENST00000582040 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
CCDC57-214ENST00000582040 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CCDC57-214ENST00000582040 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
CCDC57-214ENST00000582040 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
CCDC57-214ENST00000582040 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
CCDC57-214ENST00000582040 V9GYY9 64 aa4.16□□□□□ -1.74
CCDC57-214ENST00000582040 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
CCDC57-214ENST00000582040 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CCDC57-214ENST00000582040 Q1T7F1 81 aa4.12□□□□□ -1.75
CCDC57-214ENST00000582040 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
CCDC57-214ENST00000582040 A6NED7 52 aa4.07□□□□□ -1.76
CCDC57-214ENST00000582040 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
CCDC57-214ENST00000582040 ROMO1P60602 79 aa4.05□□□□□ -1.76
CCDC57-214ENST00000582040 MT3P25713 68 aa3.96□□□□□ -1.78
CCDC57-214ENST00000582040 PCP4P48539 62 aa3.95□□□□□ -1.78
CCDC57-214ENST00000582040 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
CCDC57-214ENST00000582040 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
CCDC57-214ENST00000582040 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
CCDC57-214ENST00000582040 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
CCDC57-214ENST00000582040 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CCDC57-214ENST00000582040 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CCDC57-214ENST00000582040 BRK1Q8WUW1 75 aa3.23□□□□□ -1.89
CCDC57-214ENST00000582040 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
CCDC57-214ENST00000582040 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
CCDC57-214ENST00000582040 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
CCDC57-214ENST00000582040 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CCDC57-214ENST00000582040 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
CCDC57-214ENST00000582040 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
CCDC57-214ENST00000582040 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
CCDC57-214ENST00000582040 SVIPQ8NHG7 77 aa2.96□□□□□ -1.94
CCDC57-214ENST00000582040 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
CCDC57-214ENST00000582040 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
CCDC57-214ENST00000582040 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
CCDC57-214ENST00000582040 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
CCDC57-214ENST00000582040 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
CCDC57-214ENST00000582040 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
CCDC57-214ENST00000582040 LUZP6Q538Z0 58 aa2.52□□□□□ -2.01
CCDC57-214ENST00000582040 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
CCDC57-214ENST00000582040 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CCDC57-214ENST00000582040 A0A0A0MQY5 61 aa2.07□□□□□ -2.08
CCDC57-214ENST00000582040 PRM1P04553 51 aa2.06□□□□□ -2.08
CCDC57-214ENST00000582040 H3BS24 57 aa2.01□□□□□ -2.09
CCDC57-214ENST00000582040 INE1O15225 51 aa1.95□□□□□ -2.1
CCDC57-214ENST00000582040 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 70.6 ms