RNA–Protein interactions for RNA: ENST00000581135.5

DDX42-212, Transcript of DEAD-box helicase 42, humanhuman

TSL 4

Gene DDX42, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-212ENST00000581135 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
DDX42-212ENST00000581135 A6NED7 52 aa5.87□□□□□ -1.47
DDX42-212ENST00000581135 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
DDX42-212ENST00000581135 PCP4P48539 62 aa5.86□□□□□ -1.47
DDX42-212ENST00000581135 RPS28P62857 69 aaKnown RBP5.86□□□□□ -1.47
DDX42-212ENST00000581135 MT1LQ93083 61 aa5.85□□□□□ -1.47
DDX42-212ENST00000581135 MT1MQ8N339 61 aa5.8□□□□□ -1.48
DDX42-212ENST00000581135 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
DDX42-212ENST00000581135 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
DDX42-212ENST00000581135 CDC42SE1Q9NRR8 79 aa5.68□□□□□ -1.5
DDX42-212ENST00000581135 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
DDX42-212ENST00000581135 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
DDX42-212ENST00000581135 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
DDX42-212ENST00000581135 ROMO1P60602 79 aa5.57□□□□□ -1.52
DDX42-212ENST00000581135 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
DDX42-212ENST00000581135 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
DDX42-212ENST00000581135 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
DDX42-212ENST00000581135 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
DDX42-212ENST00000581135 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
DDX42-212ENST00000581135 MT4P47944 62 aa5.45□□□□□ -1.54
DDX42-212ENST00000581135 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
DDX42-212ENST00000581135 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.55
DDX42-212ENST00000581135 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
DDX42-212ENST00000581135 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
DDX42-212ENST00000581135 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
DDX42-212ENST00000581135 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
DDX42-212ENST00000581135 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
DDX42-212ENST00000581135 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
DDX42-212ENST00000581135 BRK1Q8WUW1 75 aa5.17□□□□□ -1.58
DDX42-212ENST00000581135 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
DDX42-212ENST00000581135 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
DDX42-212ENST00000581135 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
DDX42-212ENST00000581135 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
DDX42-212ENST00000581135 MT1AP04731 61 aa5□□□□□ -1.61
DDX42-212ENST00000581135 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
DDX42-212ENST00000581135 KRTAP9-6A8MVA2 160 aa4.94□□□□□ -1.62
DDX42-212ENST00000581135 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
DDX42-212ENST00000581135 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
DDX42-212ENST00000581135 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
DDX42-212ENST00000581135 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
DDX42-212ENST00000581135 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
DDX42-212ENST00000581135 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
DDX42-212ENST00000581135 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
DDX42-212ENST00000581135 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
DDX42-212ENST00000581135 MT3P25713 68 aa4.61□□□□□ -1.67
DDX42-212ENST00000581135 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
DDX42-212ENST00000581135 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
DDX42-212ENST00000581135 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
DDX42-212ENST00000581135 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
DDX42-212ENST00000581135 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
DDX42-212ENST00000581135 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
DDX42-212ENST00000581135 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
DDX42-212ENST00000581135 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
DDX42-212ENST00000581135 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
DDX42-212ENST00000581135 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
DDX42-212ENST00000581135 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
DDX42-212ENST00000581135 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
DDX42-212ENST00000581135 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
DDX42-212ENST00000581135 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
DDX42-212ENST00000581135 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
DDX42-212ENST00000581135 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
DDX42-212ENST00000581135 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
DDX42-212ENST00000581135 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
DDX42-212ENST00000581135 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
DDX42-212ENST00000581135 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
DDX42-212ENST00000581135 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
DDX42-212ENST00000581135 H3BS24 57 aa3.45□□□□□ -1.86
DDX42-212ENST00000581135 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
DDX42-212ENST00000581135 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
DDX42-212ENST00000581135 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
DDX42-212ENST00000581135 PHGR1C9JFL3 82 aa3□□□□□ -1.93
DDX42-212ENST00000581135 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
DDX42-212ENST00000581135 PRM1P04553 51 aa2.83□□□□□ -1.96
DDX42-212ENST00000581135 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
DDX42-212ENST00000581135 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
DDX42-212ENST00000581135 INE1O15225 51 aa2.67□□□□□ -1.98
DDX42-212ENST00000581135 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
DDX42-212ENST00000581135 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 9.6 ms