RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 LINC00308Q8TCZ7 52 aa1.59□□□□□ -2.15
NF1-220ENST00000581113 KRTAP4-1Q9BYQ7 146 aa1.59□□□□□ -2.15
NF1-220ENST00000581113 CRIPTQ9P021 101 aa1.59□□□□□ -2.15
NF1-220ENST00000581113 RPL37P61927 97 aaKnown RBP1.58□□□□□ -2.16
NF1-220ENST00000581113 LINC00575Q6W349 94 aa1.57□□□□□ -2.16
NF1-220ENST00000581113 DEFB105AQ8NG35 78 aa1.56□□□□□ -2.16
NF1-220ENST00000581113 UBL5Q9BZL1 73 aa1.56□□□□□ -2.16
NF1-220ENST00000581113 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
NF1-220ENST00000581113 IGLV5-48A0A075B6I7 105 aa1.55□□□□□ -2.16
NF1-220ENST00000581113 MT1HP80294 61 aa1.55□□□□□ -2.16
NF1-220ENST00000581113 KRTAP19-2Q3LHN2 52 aa1.55□□□□□ -2.16
NF1-220ENST00000581113 CRCT1Q9UGL9 99 aa1.55□□□□□ -2.16
NF1-220ENST00000581113 FSIP2Q5CZC0 6907 aa1.54□□□□□ -2.16
NF1-220ENST00000581113 M0R2T5 61 aa1.51□□□□□ -2.17
NF1-220ENST00000581113 COX6B2Q6YFQ2 88 aa1.51□□□□□ -2.17
NF1-220ENST00000581113 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
NF1-220ENST00000581113 H0YGX0 51 aa1.49□□□□□ -2.17
NF1-220ENST00000581113 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
NF1-220ENST00000581113 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
NF1-220ENST00000581113 USH2AO75445 5202 aa1.45□□□□□ -2.18
NF1-220ENST00000581113 MACF1Q9UPN3 7388 aaKnown RBP1.44□□□□□ -2.18
NF1-220ENST00000581113 TP53AIP1Q9HCN2 124 aa1.44□□□□□ -2.18
NF1-220ENST00000581113 NEBP20929 6669 aa1.43□□□□□ -2.18
NF1-220ENST00000581113 K7EQZ3 153 aa1.43□□□□□ -2.18
NF1-220ENST00000581113 MT2AP02795 61 aa1.43□□□□□ -2.18
NF1-220ENST00000581113 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
NF1-220ENST00000581113 MT1FP04733 61 aa1.42□□□□□ -2.18
NF1-220ENST00000581113 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
NF1-220ENST00000581113 MRPL34Q9BQ48 92 aaKnown RBP1.4□□□□□ -2.19
NF1-220ENST00000581113 WFDC13Q8IUB5 93 aa1.38□□□□□ -2.19
NF1-220ENST00000581113 MMP24-AS1A0A0U1RRL7 71 aa1.37□□□□□ -2.19
NF1-220ENST00000581113 KRTAP19-6Q3LI70 58 aa1.37□□□□□ -2.19
NF1-220ENST00000581113 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
NF1-220ENST00000581113 H0YAA0 97 aa1.32□□□□□ -2.2
NF1-220ENST00000581113 A0A0D9SG42 100 aa1.31□□□□□ -2.2
NF1-220ENST00000581113 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
NF1-220ENST00000581113 S4R3F8 94 aa1.31□□□□□ -2.2
NF1-220ENST00000581113 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
NF1-220ENST00000581113 MT1BP07438 61 aa1.29□□□□□ -2.2
NF1-220ENST00000581113 KRTAP19-8Q3LI54 63 aa1.29□□□□□ -2.2
NF1-220ENST00000581113 SPRR2GQ9BYE4 73 aa1.29□□□□□ -2.2
NF1-220ENST00000581113 MUC12Q9UKN1 5478 aa1.28□□□□□ -2.2
NF1-220ENST00000581113 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
NF1-220ENST00000581113 KMT2DO14686 5537 aa1.24□□□□□ -2.21
NF1-220ENST00000581113 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
NF1-220ENST00000581113 KRTAP20-1Q3LI63 56 aa1.24□□□□□ -2.21
NF1-220ENST00000581113 KRTAP2-3P0C7H8 128 aa1.2□□□□□ -2.22
NF1-220ENST00000581113 MT1XP80297 61 aa1.2□□□□□ -2.22
NF1-220ENST00000581113 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
NF1-220ENST00000581113 KRTAP2-4Q9BYR9 128 aa1.2□□□□□ -2.22
NF1-220ENST00000581113 SPRR2EP22531 72 aa1.19□□□□□ -2.22
NF1-220ENST00000581113 SPRR2BP35325 72 aa1.19□□□□□ -2.22
NF1-220ENST00000581113 SPRR2AP35326 72 aa1.19□□□□□ -2.22
NF1-220ENST00000581113 M0QZ58 72 aa1.18□□□□□ -2.22
NF1-220ENST00000581113 KRTAP8-1Q8IUC2 63 aa1.18□□□□□ -2.22
NF1-220ENST00000581113 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
NF1-220ENST00000581113 SPRR2DP22532 72 aa1.16□□□□□ -2.22
NF1-220ENST00000581113 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
NF1-220ENST00000581113 MT1EP04732 61 aa1.07□□□□□ -2.24
NF1-220ENST00000581113 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
NF1-220ENST00000581113 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
NF1-220ENST00000581113 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
NF1-220ENST00000581113 KRTAP19-5Q3LI72 72 aa1.05□□□□□ -2.24
NF1-220ENST00000581113 MT1GP13640 62 aa1.04□□□□□ -2.24
NF1-220ENST00000581113 MT1MQ8N339 61 aa1.02□□□□□ -2.25
NF1-220ENST00000581113 MT1LQ93083 61 aa1.02□□□□□ -2.25
NF1-220ENST00000581113 MT4P47944 62 aa1.01□□□□□ -2.25
NF1-220ENST00000581113 TNP1P09430 55 aa1□□□□□ -2.25
NF1-220ENST00000581113 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
NF1-220ENST00000581113 KRTAP20-2Q3LI61 65 aa0.93□□□□□ -2.26
NF1-220ENST00000581113 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
NF1-220ENST00000581113 MT1AP04731 61 aa0.86□□□□□ -2.27
NF1-220ENST00000581113 PRM1P04553 51 aa0.86□□□□□ -2.27
NF1-220ENST00000581113 KRTAP6-1Q3LI64 71 aa0.86□□□□□ -2.27
NF1-220ENST00000581113 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
NF1-220ENST00000581113 KRTAP6-2Q3LI66 62 aa0.83□□□□□ -2.28
NF1-220ENST00000581113 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
NF1-220ENST00000581113 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 145.1 ms