RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 MT4P47944 62 aa7.4□□□□□ -1.22
CSNK1D-216ENST00000581108 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
CSNK1D-216ENST00000581108 ATP5EP56381 51 aaPredicted RBP7.35□□□□□ -1.23
CSNK1D-216ENST00000581108 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
CSNK1D-216ENST00000581108 KRTAP5-4Q6L8H1 288 aa7.28□□□□□ -1.24
CSNK1D-216ENST00000581108 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
CSNK1D-216ENST00000581108 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
CSNK1D-216ENST00000581108 AHNAK2Q8IVF2 5795 aa7.19□□□□□ -1.26
CSNK1D-216ENST00000581108 UQCR11O14957 56 aa7.19□□□□□ -1.26
CSNK1D-216ENST00000581108 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
CSNK1D-216ENST00000581108 TMEM258P61165 79 aa7.12□□□□□ -1.27
CSNK1D-216ENST00000581108 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
CSNK1D-216ENST00000581108 KRTAP25-1Q3LHN0 102 aa7.01□□□□□ -1.29
CSNK1D-216ENST00000581108 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
CSNK1D-216ENST00000581108 KRTAP5-5Q701N2 237 aaPredicted RBP6.94□□□□□ -1.3
CSNK1D-216ENST00000581108 K7ERS5 55 aa6.89□□□□□ -1.31
CSNK1D-216ENST00000581108 KRTAP20-2Q3LI61 65 aa6.88□□□□□ -1.31
CSNK1D-216ENST00000581108 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
CSNK1D-216ENST00000581108 PSPHP1O15172 72 aa6.83□□□□□ -1.32
CSNK1D-216ENST00000581108 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
CSNK1D-216ENST00000581108 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
CSNK1D-216ENST00000581108 KRTAP12-4P60329 112 aa6.78□□□□□ -1.32
CSNK1D-216ENST00000581108 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
CSNK1D-216ENST00000581108 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
CSNK1D-216ENST00000581108 V9GYY9 64 aa6.77□□□□□ -1.33
CSNK1D-216ENST00000581108 Q1T7F1 81 aa6.74□□□□□ -1.33
CSNK1D-216ENST00000581108 KRTAP5-7Q6L8G8 165 aa6.73□□□□□ -1.33
CSNK1D-216ENST00000581108 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CSNK1D-216ENST00000581108 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
CSNK1D-216ENST00000581108 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
CSNK1D-216ENST00000581108 A6NED7 52 aa6.57□□□□□ -1.36
CSNK1D-216ENST00000581108 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
CSNK1D-216ENST00000581108 MT1AP04731 61 aa6.42□□□□□ -1.38
CSNK1D-216ENST00000581108 ROMO1P60602 79 aa6.42□□□□□ -1.38
CSNK1D-216ENST00000581108 KRTAP6-1Q3LI64 71 aa6.42□□□□□ -1.38
CSNK1D-216ENST00000581108 RPS28P62857 69 aaKnown RBP6.37□□□□□ -1.39
CSNK1D-216ENST00000581108 KRTAP5-2Q701N4 177 aa6.35□□□□□ -1.39
CSNK1D-216ENST00000581108 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
CSNK1D-216ENST00000581108 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
CSNK1D-216ENST00000581108 PCP4P48539 62 aa6.29□□□□□ -1.4
CSNK1D-216ENST00000581108 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
CSNK1D-216ENST00000581108 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
CSNK1D-216ENST00000581108 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
CSNK1D-216ENST00000581108 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
CSNK1D-216ENST00000581108 AHNAKQ09666 5890 aaKnown RBP5.95□□□□□ -1.46
CSNK1D-216ENST00000581108 MUC5ACP98088 5654 aa5.92□□□□□ -1.46
CSNK1D-216ENST00000581108 MUC5BQ9HC84 5762 aaPredicted RBP5.89□□□□□ -1.47
CSNK1D-216ENST00000581108 MT3P25713 68 aa5.88□□□□□ -1.47
CSNK1D-216ENST00000581108 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
CSNK1D-216ENST00000581108 KRTAP5-1Q6L8H4 278 aa5.73□□□□□ -1.49
CSNK1D-216ENST00000581108 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
CSNK1D-216ENST00000581108 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
CSNK1D-216ENST00000581108 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.59
CSNK1D-216ENST00000581108 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
CSNK1D-216ENST00000581108 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
CSNK1D-216ENST00000581108 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
CSNK1D-216ENST00000581108 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
CSNK1D-216ENST00000581108 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
CSNK1D-216ENST00000581108 PRAC1Q96KF2 57 aa5□□□□□ -1.61
CSNK1D-216ENST00000581108 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
CSNK1D-216ENST00000581108 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
CSNK1D-216ENST00000581108 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
CSNK1D-216ENST00000581108 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
CSNK1D-216ENST00000581108 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
CSNK1D-216ENST00000581108 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
CSNK1D-216ENST00000581108 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
CSNK1D-216ENST00000581108 H3BS24 57 aa4.42□□□□□ -1.7
CSNK1D-216ENST00000581108 KRTAP21-2Q3LI59 83 aa4.23□□□□□ -1.73
CSNK1D-216ENST00000581108 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
CSNK1D-216ENST00000581108 PHGR1C9JFL3 82 aa4.09□□□□□ -1.75
CSNK1D-216ENST00000581108 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
CSNK1D-216ENST00000581108 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
CSNK1D-216ENST00000581108 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
CSNK1D-216ENST00000581108 PRM1P04553 51 aa3.28□□□□□ -1.88
CSNK1D-216ENST00000581108 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
CSNK1D-216ENST00000581108 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
CSNK1D-216ENST00000581108 INE1O15225 51 aa3.01□□□□□ -1.93
CSNK1D-216ENST00000581108 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 118 ms