RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 A0A1B0GU33 70 aa4.59□□□□□ -1.67
SENP3-204ENST00000580997 ANAPC13Q9BS18 74 aa4.59□□□□□ -1.67
SENP3-204ENST00000580997 KRTAP12-1P59990 96 aa4.56□□□□□ -1.68
SENP3-204ENST00000580997 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
SENP3-204ENST00000580997 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
SENP3-204ENST00000580997 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
SENP3-204ENST00000580997 MT1GP13640 62 aa4.53□□□□□ -1.68
SENP3-204ENST00000580997 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
SENP3-204ENST00000580997 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
SENP3-204ENST00000580997 A0A1B0GU69 56 aa4.44□□□□□ -1.7
SENP3-204ENST00000580997 MT1MQ8N339 61 aa4.43□□□□□ -1.7
SENP3-204ENST00000580997 MT1LQ93083 61 aa4.43□□□□□ -1.7
SENP3-204ENST00000580997 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
SENP3-204ENST00000580997 A8MU10 97 aa4.41□□□□□ -1.7
SENP3-204ENST00000580997 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
SENP3-204ENST00000580997 ATP5EP56381 51 aaPredicted RBP4.39□□□□□ -1.71
SENP3-204ENST00000580997 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
SENP3-204ENST00000580997 C10orf95Q9H7T3 257 aa4.38□□□□□ -1.71
SENP3-204ENST00000580997 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
SENP3-204ENST00000580997 TNP1P09430 55 aa4.36□□□□□ -1.71
SENP3-204ENST00000580997 TMEM258P61165 79 aa4.35□□□□□ -1.71
SENP3-204ENST00000580997 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
SENP3-204ENST00000580997 MT4P47944 62 aa4.32□□□□□ -1.72
SENP3-204ENST00000580997 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
SENP3-204ENST00000580997 AHNAK2Q8IVF2 5795 aa4.27□□□□□ -1.73
SENP3-204ENST00000580997 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
SENP3-204ENST00000580997 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
SENP3-204ENST00000580997 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
SENP3-204ENST00000580997 UQCR11O14957 56 aa4.15□□□□□ -1.75
SENP3-204ENST00000580997 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
SENP3-204ENST00000580997 PCP4P48539 62 aa4.13□□□□□ -1.75
SENP3-204ENST00000580997 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
SENP3-204ENST00000580997 Q1T7F1 81 aa4.08□□□□□ -1.76
SENP3-204ENST00000580997 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
SENP3-204ENST00000580997 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
SENP3-204ENST00000580997 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
SENP3-204ENST00000580997 V9GYY9 64 aa4.05□□□□□ -1.76
SENP3-204ENST00000580997 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
SENP3-204ENST00000580997 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
SENP3-204ENST00000580997 PSPHP1O15172 72 aa4.02□□□□□ -1.77
SENP3-204ENST00000580997 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
SENP3-204ENST00000580997 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
SENP3-204ENST00000580997 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
SENP3-204ENST00000580997 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
SENP3-204ENST00000580997 K7ERS5 55 aa3.96□□□□□ -1.78
SENP3-204ENST00000580997 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
SENP3-204ENST00000580997 A6NED7 52 aa3.87□□□□□ -1.79
SENP3-204ENST00000580997 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
SENP3-204ENST00000580997 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
SENP3-204ENST00000580997 MT1AP04731 61 aa3.76□□□□□ -1.81
SENP3-204ENST00000580997 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SENP3-204ENST00000580997 ROMO1P60602 79 aa3.69□□□□□ -1.82
SENP3-204ENST00000580997 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
SENP3-204ENST00000580997 MT3P25713 68 aa3.57□□□□□ -1.84
SENP3-204ENST00000580997 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
SENP3-204ENST00000580997 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
SENP3-204ENST00000580997 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
SENP3-204ENST00000580997 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
SENP3-204ENST00000580997 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
SENP3-204ENST00000580997 PRO0628Q9UI54 55 aa3.22□□□□□ -1.89
SENP3-204ENST00000580997 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
SENP3-204ENST00000580997 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
SENP3-204ENST00000580997 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
SENP3-204ENST00000580997 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SENP3-204ENST00000580997 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
SENP3-204ENST00000580997 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
SENP3-204ENST00000580997 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
SENP3-204ENST00000580997 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SENP3-204ENST00000580997 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
SENP3-204ENST00000580997 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
SENP3-204ENST00000580997 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
SENP3-204ENST00000580997 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
SENP3-204ENST00000580997 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
SENP3-204ENST00000580997 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
SENP3-204ENST00000580997 PRM1P04553 51 aa1.89□□□□□ -2.11
SENP3-204ENST00000580997 INE1O15225 51 aa1.84□□□□□ -2.11
SENP3-204ENST00000580997 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
SENP3-204ENST00000580997 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 35.4 ms