RNA–Protein interactions for RNA: ENST00000580977.1

C19orf47-205, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 4

Gene C19orf47, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-205ENST00000580977 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
C19orf47-205ENST00000580977 A8MU10 97 aa5.27□□□□□ -1.57
C19orf47-205ENST00000580977 TNP1P09430 55 aa5.27□□□□□ -1.57
C19orf47-205ENST00000580977 MT4P47944 62 aa5.27□□□□□ -1.57
C19orf47-205ENST00000580977 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
C19orf47-205ENST00000580977 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
C19orf47-205ENST00000580977 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
C19orf47-205ENST00000580977 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
C19orf47-205ENST00000580977 V9GYY9 64 aa5.22□□□□□ -1.57
C19orf47-205ENST00000580977 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
C19orf47-205ENST00000580977 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
C19orf47-205ENST00000580977 UQCR11O14957 56 aa5.17□□□□□ -1.58
C19orf47-205ENST00000580977 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
C19orf47-205ENST00000580977 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
C19orf47-205ENST00000580977 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
C19orf47-205ENST00000580977 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
C19orf47-205ENST00000580977 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
C19orf47-205ENST00000580977 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
C19orf47-205ENST00000580977 K7ERS5 55 aa5.01□□□□□ -1.61
C19orf47-205ENST00000580977 Q1T7F1 81 aa5.01□□□□□ -1.61
C19orf47-205ENST00000580977 PSPHP1O15172 72 aa4.99□□□□□ -1.61
C19orf47-205ENST00000580977 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
C19orf47-205ENST00000580977 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
C19orf47-205ENST00000580977 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
C19orf47-205ENST00000580977 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
C19orf47-205ENST00000580977 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
C19orf47-205ENST00000580977 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
C19orf47-205ENST00000580977 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
C19orf47-205ENST00000580977 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
C19orf47-205ENST00000580977 A6NED7 52 aa4.87□□□□□ -1.63
C19orf47-205ENST00000580977 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
C19orf47-205ENST00000580977 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
C19orf47-205ENST00000580977 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
C19orf47-205ENST00000580977 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
C19orf47-205ENST00000580977 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
C19orf47-205ENST00000580977 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
C19orf47-205ENST00000580977 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
C19orf47-205ENST00000580977 H3BS24 57 aa4.69□□□□□ -1.66
C19orf47-205ENST00000580977 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
C19orf47-205ENST00000580977 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.67
C19orf47-205ENST00000580977 ROMO1P60602 79 aa4.63□□□□□ -1.67
C19orf47-205ENST00000580977 MT1AP04731 61 aa4.55□□□□□ -1.68
C19orf47-205ENST00000580977 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
C19orf47-205ENST00000580977 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
C19orf47-205ENST00000580977 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
C19orf47-205ENST00000580977 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
C19orf47-205ENST00000580977 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
C19orf47-205ENST00000580977 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
C19orf47-205ENST00000580977 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
C19orf47-205ENST00000580977 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
C19orf47-205ENST00000580977 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
C19orf47-205ENST00000580977 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
C19orf47-205ENST00000580977 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
C19orf47-205ENST00000580977 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
C19orf47-205ENST00000580977 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
C19orf47-205ENST00000580977 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
C19orf47-205ENST00000580977 MT3P25713 68 aa4.17□□□□□ -1.74
C19orf47-205ENST00000580977 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
C19orf47-205ENST00000580977 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
C19orf47-205ENST00000580977 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
C19orf47-205ENST00000580977 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
C19orf47-205ENST00000580977 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
C19orf47-205ENST00000580977 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
C19orf47-205ENST00000580977 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
C19orf47-205ENST00000580977 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
C19orf47-205ENST00000580977 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
C19orf47-205ENST00000580977 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
C19orf47-205ENST00000580977 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
C19orf47-205ENST00000580977 INE1O15225 51 aa3.24□□□□□ -1.89
C19orf47-205ENST00000580977 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
C19orf47-205ENST00000580977 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
C19orf47-205ENST00000580977 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
C19orf47-205ENST00000580977 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
C19orf47-205ENST00000580977 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
C19orf47-205ENST00000580977 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
C19orf47-205ENST00000580977 PRM1P04553 51 aa2.35□□□□□ -2.03
C19orf47-205ENST00000580977 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
C19orf47-205ENST00000580977 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 155.1 ms