RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
SUPT4H1-204ENST00000580947 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
SUPT4H1-204ENST00000580947 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
SUPT4H1-204ENST00000580947 MT4P47944 62 aa3.64□□□□□ -1.83
SUPT4H1-204ENST00000580947 TMEM258P61165 79 aa3.63□□□□□ -1.83
SUPT4H1-204ENST00000580947 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
SUPT4H1-204ENST00000580947 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SUPT4H1-204ENST00000580947 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
SUPT4H1-204ENST00000580947 UQCR11O14957 56 aa3.59□□□□□ -1.83
SUPT4H1-204ENST00000580947 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
SUPT4H1-204ENST00000580947 LOC100996750A0A140TA64 210 aa3.56□□□□□ -1.84
SUPT4H1-204ENST00000580947 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
SUPT4H1-204ENST00000580947 H3BS24 57 aa3.53□□□□□ -1.84
SUPT4H1-204ENST00000580947 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
SUPT4H1-204ENST00000580947 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
SUPT4H1-204ENST00000580947 PCP4P48539 62 aa3.5□□□□□ -1.85
SUPT4H1-204ENST00000580947 KRTAP5-5Q701N2 237 aaPredicted RBP3.5□□□□□ -1.85
SUPT4H1-204ENST00000580947 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
SUPT4H1-204ENST00000580947 Q1T7F1 81 aa3.44□□□□□ -1.86
SUPT4H1-204ENST00000580947 PSPHP1O15172 72 aa3.43□□□□□ -1.86
SUPT4H1-204ENST00000580947 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
SUPT4H1-204ENST00000580947 KRTAP23-1A1A580 65 aa3.4□□□□□ -1.87
SUPT4H1-204ENST00000580947 V9GYY9 64 aa3.4□□□□□ -1.87
SUPT4H1-204ENST00000580947 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
SUPT4H1-204ENST00000580947 K7ERS5 55 aa3.39□□□□□ -1.87
SUPT4H1-204ENST00000580947 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
SUPT4H1-204ENST00000580947 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
SUPT4H1-204ENST00000580947 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
SUPT4H1-204ENST00000580947 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
SUPT4H1-204ENST00000580947 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
SUPT4H1-204ENST00000580947 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SUPT4H1-204ENST00000580947 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
SUPT4H1-204ENST00000580947 A6NED7 52 aa3.29□□□□□ -1.88
SUPT4H1-204ENST00000580947 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
SUPT4H1-204ENST00000580947 CDC42SE1Q9NRR8 79 aa3.25□□□□□ -1.89
SUPT4H1-204ENST00000580947 ROMO1P60602 79 aa3.22□□□□□ -1.89
SUPT4H1-204ENST00000580947 MT1AP04731 61 aa3.21□□□□□ -1.9
SUPT4H1-204ENST00000580947 RPS28P62857 69 aaKnown RBP3.21□□□□□ -1.9
SUPT4H1-204ENST00000580947 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
SUPT4H1-204ENST00000580947 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
SUPT4H1-204ENST00000580947 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
SUPT4H1-204ENST00000580947 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
SUPT4H1-204ENST00000580947 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
SUPT4H1-204ENST00000580947 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
SUPT4H1-204ENST00000580947 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
SUPT4H1-204ENST00000580947 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
SUPT4H1-204ENST00000580947 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
SUPT4H1-204ENST00000580947 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
SUPT4H1-204ENST00000580947 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
SUPT4H1-204ENST00000580947 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
SUPT4H1-204ENST00000580947 MT3P25713 68 aa2.9□□□□□ -1.95
SUPT4H1-204ENST00000580947 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SUPT4H1-204ENST00000580947 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
SUPT4H1-204ENST00000580947 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
SUPT4H1-204ENST00000580947 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
SUPT4H1-204ENST00000580947 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
SUPT4H1-204ENST00000580947 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
SUPT4H1-204ENST00000580947 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
SUPT4H1-204ENST00000580947 PRAC1Q96KF2 57 aa2.55□□□□□ -2
SUPT4H1-204ENST00000580947 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
SUPT4H1-204ENST00000580947 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SUPT4H1-204ENST00000580947 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
SUPT4H1-204ENST00000580947 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
SUPT4H1-204ENST00000580947 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
SUPT4H1-204ENST00000580947 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
SUPT4H1-204ENST00000580947 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
SUPT4H1-204ENST00000580947 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
SUPT4H1-204ENST00000580947 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
SUPT4H1-204ENST00000580947 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
SUPT4H1-204ENST00000580947 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SUPT4H1-204ENST00000580947 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
SUPT4H1-204ENST00000580947 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
SUPT4H1-204ENST00000580947 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
SUPT4H1-204ENST00000580947 INE1O15225 51 aa1.72□□□□□ -2.13
SUPT4H1-204ENST00000580947 PRM1P04553 51 aa1.65□□□□□ -2.15
SUPT4H1-204ENST00000580947 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SUPT4H1-204ENST00000580947 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms