RNA–Protein interactions for RNA: ENST00000580288.2

STRADA-215, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-215	ENST00000580288	LCE3A	Q5TA76	89 aa		5.31	□□□□□ -1.56
STRADA-215	ENST00000580288	C10orf95	Q9H7T3	257 aa		5.31	□□□□□ -1.56
STRADA-215	ENST00000580288	TMEM258	P61165	79 aa		5.3	□□□□□ -1.56
STRADA-215	ENST00000580288		A8MU10	97 aa		5.29	□□□□□ -1.56
STRADA-215	ENST00000580288	TNP1	P09430	55 aa		5.28	□□□□□ -1.56
STRADA-215	ENST00000580288	KRTAP5-4	Q6L8H1	288 aa		5.27	□□□□□ -1.57
STRADA-215	ENST00000580288	KRTAP4-3	Q9BYR4	195 aa		5.27	□□□□□ -1.57
STRADA-215	ENST00000580288	AHNAK2	Q8IVF2	5795 aa		5.21	□□□□□ -1.57
STRADA-215	ENST00000580288	PRR15L	Q9BU68	103 aa		5.19	□□□□□ -1.58
STRADA-215	ENST00000580288	KRTAP19-4	Q3LI73	84 aa		5.16	□□□□□ -1.58
STRADA-215	ENST00000580288	KRTAP5-10	Q6L8G5	202 aa		5.15	□□□□□ -1.59
STRADA-215	ENST00000580288	KRTAP4-12	Q9BQ66	201 aa		5.15	□□□□□ -1.59
STRADA-215	ENST00000580288	LINC01558	Q9Y6Z2	57 aa		5.14	□□□□□ -1.59
STRADA-215	ENST00000580288	KRTAP12-3	P60328	96 aa		5.11	□□□□□ -1.59
STRADA-215	ENST00000580288	KRTAP4-7	Q9BYR0	210 aa		5.09	□□□□□ -1.59
STRADA-215	ENST00000580288	SVIP	Q8NHG7	77 aa		5.05	□□□□□ -1.6
STRADA-215	ENST00000580288		V9GYY9	64 aa		5.05	□□□□□ -1.6
STRADA-215	ENST00000580288	KRTAP23-1	A1A580	65 aa		5.03	□□□□□ -1.6
STRADA-215	ENST00000580288	PCP4	P48539	62 aa		5.02	□□□□□ -1.61
STRADA-215	ENST00000580288	UQCR11	O14957	56 aa		5.01	□□□□□ -1.61
STRADA-215	ENST00000580288	KRTAP5-3	Q6L8H2	238 aa		5	□□□□□ -1.61
STRADA-215	ENST00000580288	KRTAP20-2	Q3LI61	65 aa		4.99	□□□□□ -1.61
STRADA-215	ENST00000580288	KRTAP5-7	Q6L8G8	165 aa		4.98	□□□□□ -1.61
STRADA-215	ENST00000580288	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.98	□□□□□ -1.61
STRADA-215	ENST00000580288		Q1T7F1	81 aa		4.97	□□□□□ -1.61
STRADA-215	ENST00000580288	RPS28	P62857	69 aa	Known RBP	4.95	□□□□□ -1.62
STRADA-215	ENST00000580288	SPRR5	A0A1B0GTR4	108 aa		4.94	□□□□□ -1.62
STRADA-215	ENST00000580288	KRTAP12-4	P60329	112 aa		4.9	□□□□□ -1.63
STRADA-215	ENST00000580288	KRTAP25-1	Q3LHN0	102 aa		4.9	□□□□□ -1.63
STRADA-215	ENST00000580288	MIR22HG	Q0VDD5	57 aa		4.88	□□□□□ -1.63
STRADA-215	ENST00000580288	KRTAP9-9	Q9BYP9	154 aa		4.88	□□□□□ -1.63
STRADA-215	ENST00000580288	KRTAP9-4	Q9BYQ2	154 aa		4.88	□□□□□ -1.63
STRADA-215	ENST00000580288	SYNE1	Q8NF91	8797 aa	Known RBP	4.87	□□□□□ -1.63
STRADA-215	ENST00000580288	PSPHP1	O15172	72 aa		4.86	□□□□□ -1.63
STRADA-215	ENST00000580288		K7ERS5	55 aa		4.83	□□□□□ -1.64
STRADA-215	ENST00000580288		A6NED7	52 aa		4.76	□□□□□ -1.65
STRADA-215	ENST00000580288	KRTAP15-1	Q3LI76	137 aa		4.71	□□□□□ -1.66
STRADA-215	ENST00000580288	LCE3C	Q5T5A8	94 aa		4.67	□□□□□ -1.66
STRADA-215	ENST00000580288	CDC42SE1	Q9NRR8	79 aa		4.6	□□□□□ -1.67
STRADA-215	ENST00000580288	MT1A	P04731	61 aa		4.59	□□□□□ -1.67
STRADA-215	ENST00000580288	KRTAP5-2	Q701N4	177 aa		4.59	□□□□□ -1.67
STRADA-215	ENST00000580288	KRTAP4-11	Q9BYQ6	195 aa		4.59	□□□□□ -1.67
STRADA-215	ENST00000580288	KRTAP6-1	Q3LI64	71 aa		4.56	□□□□□ -1.68
STRADA-215	ENST00000580288	ROMO1	P60602	79 aa		4.47	□□□□□ -1.69
STRADA-215	ENST00000580288	KRTAP5-8	O75690	187 aa		4.44	□□□□□ -1.7
STRADA-215	ENST00000580288	KRTAP9-6	A8MVA2	160 aa		4.41	□□□□□ -1.7
STRADA-215	ENST00000580288		A0A0A0MQY5	61 aa		4.4	□□□□□ -1.71
STRADA-215	ENST00000580288	KRTAP6-2	Q3LI66	62 aa		4.39	□□□□□ -1.71
STRADA-215	ENST00000580288	OBSCN	Q5VST9	7968 aa		4.38	□□□□□ -1.71
STRADA-215	ENST00000580288	MUC5AC	P98088	5654 aa		4.34	□□□□□ -1.71
STRADA-215	ENST00000580288	AHNAK	Q09666	5890 aa	Known RBP	4.33	□□□□□ -1.72
STRADA-215	ENST00000580288	KRTAP4-2	Q9BYR5	136 aa		4.32	□□□□□ -1.72
STRADA-215	ENST00000580288	BRK1	Q8WUW1	75 aa		4.31	□□□□□ -1.72
STRADA-215	ENST00000580288	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.31	□□□□□ -1.72
STRADA-215	ENST00000580288	MT3	P25713	68 aa		4.2	□□□□□ -1.74
STRADA-215	ENST00000580288	KRTAP5-1	Q6L8H4	278 aa		4.14	□□□□□ -1.75
STRADA-215	ENST00000580288	PMAIP1	Q13794	54 aa		4.11	□□□□□ -1.75
STRADA-215	ENST00000580288	PRO0628	Q9UI54	55 aa		3.98	□□□□□ -1.77
STRADA-215	ENST00000580288	LCE1E	Q5T753	118 aa		3.9	□□□□□ -1.79
STRADA-215	ENST00000580288	PRAC1	Q96KF2	57 aa		3.79	□□□□□ -1.8
STRADA-215	ENST00000580288	KTN1-AS1	Q86SY8	53 aa		3.74	□□□□□ -1.81
STRADA-215	ENST00000580288	LCE1B	Q5T7P3	118 aa		3.68	□□□□□ -1.82
STRADA-215	ENST00000580288	LCE1C	Q5T751	118 aa		3.62	□□□□□ -1.83
STRADA-215	ENST00000580288	NDUFAF8	A1L188	74 aa		3.36	□□□□□ -1.87
STRADA-215	ENST00000580288	LCE3D	Q9BYE3	92 aa		3.34	□□□□□ -1.87
STRADA-215	ENST00000580288	LUZP6	Q538Z0	58 aa		3.32	□□□□□ -1.88
STRADA-215	ENST00000580288	LCE1F	Q5T754	118 aa		3.31	□□□□□ -1.88
STRADA-215	ENST00000580288	KRTAP5-11	Q6L8G4	156 aa		3.31	□□□□□ -1.88
STRADA-215	ENST00000580288	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.28	□□□□□ -1.88
STRADA-215	ENST00000580288	LCE3E	Q5T5B0	92 aa		3.11	□□□□□ -1.91
STRADA-215	ENST00000580288	PHGR1	C9JFL3	82 aa		3.02	□□□□□ -1.93
STRADA-215	ENST00000580288	KRTAP21-2	Q3LI59	83 aa		3	□□□□□ -1.93
STRADA-215	ENST00000580288	KRTAP4-4	Q9BYR3	166 aa		2.77	□□□□□ -1.97
STRADA-215	ENST00000580288	MUC19	Q7Z5P9	8384 aa		2.73	□□□□□ -1.97
STRADA-215	ENST00000580288	INE1	O15225	51 aa		2.37	□□□□□ -2.03
STRADA-215	ENST00000580288	KRTAP21-1	Q3LI58	79 aa		2.3	□□□□□ -2.04
STRADA-215	ENST00000580288	PRM1	P04553	51 aa		2.25	□□□□□ -2.05
STRADA-215	ENST00000580288	MUC16	Q8WXI7	14507 aa		1.91	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 146.2 ms