RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
NDEL1-206ENST00000579880 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
NDEL1-206ENST00000579880 MT4P47944 62 aa5.99□□□□□ -1.45
NDEL1-206ENST00000579880 KRTAP5-4Q6L8H1 288 aa5.9□□□□□ -1.46
NDEL1-206ENST00000579880 HMCN1Q96RW7 5635 aa5.89□□□□□ -1.47
NDEL1-206ENST00000579880 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
NDEL1-206ENST00000579880 UQCR11O14957 56 aa5.88□□□□□ -1.47
NDEL1-206ENST00000579880 TMEM258P61165 79 aa5.85□□□□□ -1.47
NDEL1-206ENST00000579880 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
NDEL1-206ENST00000579880 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
NDEL1-206ENST00000579880 AHNAK2Q8IVF2 5795 aa5.76□□□□□ -1.49
NDEL1-206ENST00000579880 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
NDEL1-206ENST00000579880 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
NDEL1-206ENST00000579880 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
NDEL1-206ENST00000579880 K7ERS5 55 aa5.67□□□□□ -1.5
NDEL1-206ENST00000579880 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
NDEL1-206ENST00000579880 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
NDEL1-206ENST00000579880 KRTAP20-2Q3LI61 65 aa5.58□□□□□ -1.52
NDEL1-206ENST00000579880 V9GYY9 64 aa5.58□□□□□ -1.52
NDEL1-206ENST00000579880 PSPHP1O15172 72 aa5.57□□□□□ -1.52
NDEL1-206ENST00000579880 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
NDEL1-206ENST00000579880 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
NDEL1-206ENST00000579880 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
NDEL1-206ENST00000579880 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
NDEL1-206ENST00000579880 Q1T7F1 81 aa5.51□□□□□ -1.53
NDEL1-206ENST00000579880 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
NDEL1-206ENST00000579880 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
NDEL1-206ENST00000579880 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
NDEL1-206ENST00000579880 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
NDEL1-206ENST00000579880 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
NDEL1-206ENST00000579880 A6NED7 52 aa5.38□□□□□ -1.55
NDEL1-206ENST00000579880 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
NDEL1-206ENST00000579880 ROMO1P60602 79 aa5.25□□□□□ -1.57
NDEL1-206ENST00000579880 MT1AP04731 61 aa5.23□□□□□ -1.57
NDEL1-206ENST00000579880 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
NDEL1-206ENST00000579880 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
NDEL1-206ENST00000579880 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
NDEL1-206ENST00000579880 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
NDEL1-206ENST00000579880 KRTAP9-6A8MVA2 160 aa5.09□□□□□ -1.59
NDEL1-206ENST00000579880 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
NDEL1-206ENST00000579880 KRTAP6-2Q3LI66 62 aa4.99□□□□□ -1.61
NDEL1-206ENST00000579880 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
NDEL1-206ENST00000579880 PCP4P48539 62 aa4.88□□□□□ -1.63
NDEL1-206ENST00000579880 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
NDEL1-206ENST00000579880 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
NDEL1-206ENST00000579880 MT3P25713 68 aa4.79□□□□□ -1.64
NDEL1-206ENST00000579880 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
NDEL1-206ENST00000579880 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
NDEL1-206ENST00000579880 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
NDEL1-206ENST00000579880 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
NDEL1-206ENST00000579880 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
NDEL1-206ENST00000579880 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
NDEL1-206ENST00000579880 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
NDEL1-206ENST00000579880 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
NDEL1-206ENST00000579880 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
NDEL1-206ENST00000579880 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
NDEL1-206ENST00000579880 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
NDEL1-206ENST00000579880 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
NDEL1-206ENST00000579880 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
NDEL1-206ENST00000579880 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
NDEL1-206ENST00000579880 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
NDEL1-206ENST00000579880 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
NDEL1-206ENST00000579880 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
NDEL1-206ENST00000579880 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
NDEL1-206ENST00000579880 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
NDEL1-206ENST00000579880 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
NDEL1-206ENST00000579880 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
NDEL1-206ENST00000579880 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
NDEL1-206ENST00000579880 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
NDEL1-206ENST00000579880 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
NDEL1-206ENST00000579880 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
NDEL1-206ENST00000579880 H3BS24 57 aa2.7□□□□□ -1.98
NDEL1-206ENST00000579880 PRM1P04553 51 aa2.68□□□□□ -1.98
NDEL1-206ENST00000579880 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
NDEL1-206ENST00000579880 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
NDEL1-206ENST00000579880 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
NDEL1-206ENST00000579880 INE1O15225 51 aa2.04□□□□□ -2.08
NDEL1-206ENST00000579880 A0A0A0MQY5 61 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 72.6 ms