RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
MKS1-208ENST00000579358 K7ERS5 55 aa3.8□□□□□ -1.8
MKS1-208ENST00000579358 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
MKS1-208ENST00000579358 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
MKS1-208ENST00000579358 TNP1P09430 55 aa3.78□□□□□ -1.8
MKS1-208ENST00000579358 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
MKS1-208ENST00000579358 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
MKS1-208ENST00000579358 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
MKS1-208ENST00000579358 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
MKS1-208ENST00000579358 SPRR2DP22532 72 aa3.74□□□□□ -1.81
MKS1-208ENST00000579358 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
MKS1-208ENST00000579358 MT1EP04732 61 aa3.73□□□□□ -1.81
MKS1-208ENST00000579358 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
MKS1-208ENST00000579358 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
MKS1-208ENST00000579358 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
MKS1-208ENST00000579358 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
MKS1-208ENST00000579358 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
MKS1-208ENST00000579358 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
MKS1-208ENST00000579358 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
MKS1-208ENST00000579358 ROMO1P60602 79 aa3.67□□□□□ -1.82
MKS1-208ENST00000579358 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
MKS1-208ENST00000579358 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
MKS1-208ENST00000579358 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
MKS1-208ENST00000579358 MT1GP13640 62 aa3.6□□□□□ -1.83
MKS1-208ENST00000579358 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
MKS1-208ENST00000579358 MT1LQ93083 61 aa3.59□□□□□ -1.83
MKS1-208ENST00000579358 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
MKS1-208ENST00000579358 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
MKS1-208ENST00000579358 MT1MQ8N339 61 aa3.54□□□□□ -1.84
MKS1-208ENST00000579358 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
MKS1-208ENST00000579358 MT3P25713 68 aa3.4□□□□□ -1.87
MKS1-208ENST00000579358 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
MKS1-208ENST00000579358 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
MKS1-208ENST00000579358 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
MKS1-208ENST00000579358 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
MKS1-208ENST00000579358 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
MKS1-208ENST00000579358 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
MKS1-208ENST00000579358 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
MKS1-208ENST00000579358 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
MKS1-208ENST00000579358 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
MKS1-208ENST00000579358 MT4P47944 62 aa3.23□□□□□ -1.89
MKS1-208ENST00000579358 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
MKS1-208ENST00000579358 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
MKS1-208ENST00000579358 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
MKS1-208ENST00000579358 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
MKS1-208ENST00000579358 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
MKS1-208ENST00000579358 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
MKS1-208ENST00000579358 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
MKS1-208ENST00000579358 MT1AP04731 61 aa3.07□□□□□ -1.92
MKS1-208ENST00000579358 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
MKS1-208ENST00000579358 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
MKS1-208ENST00000579358 KRTAP5-3Q6L8H2 238 aa3□□□□□ -1.93
MKS1-208ENST00000579358 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
MKS1-208ENST00000579358 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
MKS1-208ENST00000579358 INE1O15225 51 aa2.93□□□□□ -1.94
MKS1-208ENST00000579358 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
MKS1-208ENST00000579358 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
MKS1-208ENST00000579358 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
MKS1-208ENST00000579358 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
MKS1-208ENST00000579358 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
MKS1-208ENST00000579358 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
MKS1-208ENST00000579358 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
MKS1-208ENST00000579358 LCE1EQ5T753 118 aa2.55□□□□□ -2
MKS1-208ENST00000579358 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
MKS1-208ENST00000579358 MUC5ACP98088 5654 aa2.55□□□□□ -2
MKS1-208ENST00000579358 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
MKS1-208ENST00000579358 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
MKS1-208ENST00000579358 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
MKS1-208ENST00000579358 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
MKS1-208ENST00000579358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
MKS1-208ENST00000579358 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
MKS1-208ENST00000579358 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
MKS1-208ENST00000579358 PRM1P04553 51 aa1.84□□□□□ -2.11
MKS1-208ENST00000579358 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
MKS1-208ENST00000579358 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
MKS1-208ENST00000579358 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
MKS1-208ENST00000579358 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
MKS1-208ENST00000579358 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 48.2 ms