RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 A8MU10 97 aa4.01□□□□□ -1.77
SUPT4H1-203ENST00000579289 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
SUPT4H1-203ENST00000579289 ATP5EP56381 51 aaPredicted RBP3.99□□□□□ -1.77
SUPT4H1-203ENST00000579289 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
SUPT4H1-203ENST00000579289 PRR15LQ9BU68 103 aa3.94□□□□□ -1.78
SUPT4H1-203ENST00000579289 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
SUPT4H1-203ENST00000579289 LINC01558Q9Y6Z2 57 aa3.93□□□□□ -1.78
SUPT4H1-203ENST00000579289 MT1LQ93083 61 aa3.92□□□□□ -1.78
SUPT4H1-203ENST00000579289 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
SUPT4H1-203ENST00000579289 TMEM258P61165 79 aa3.9□□□□□ -1.79
SUPT4H1-203ENST00000579289 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
SUPT4H1-203ENST00000579289 TNP1P09430 55 aa3.86□□□□□ -1.79
SUPT4H1-203ENST00000579289 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
SUPT4H1-203ENST00000579289 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
SUPT4H1-203ENST00000579289 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
SUPT4H1-203ENST00000579289 UQCR11O14957 56 aa3.82□□□□□ -1.8
SUPT4H1-203ENST00000579289 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
SUPT4H1-203ENST00000579289 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
SUPT4H1-203ENST00000579289 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
SUPT4H1-203ENST00000579289 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SUPT4H1-203ENST00000579289 MIR22HGQ0VDD5 57 aa3.75□□□□□ -1.81
SUPT4H1-203ENST00000579289 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SUPT4H1-203ENST00000579289 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SUPT4H1-203ENST00000579289 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SUPT4H1-203ENST00000579289 V9GYY9 64 aa3.69□□□□□ -1.82
SUPT4H1-203ENST00000579289 Q1T7F1 81 aa3.68□□□□□ -1.82
SUPT4H1-203ENST00000579289 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SUPT4H1-203ENST00000579289 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
SUPT4H1-203ENST00000579289 K7ERS5 55 aa3.65□□□□□ -1.83
SUPT4H1-203ENST00000579289 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
SUPT4H1-203ENST00000579289 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
SUPT4H1-203ENST00000579289 LOC100996750A0A140TA64 210 aa3.58□□□□□ -1.84
SUPT4H1-203ENST00000579289 A6NED7 52 aa3.57□□□□□ -1.84
SUPT4H1-203ENST00000579289 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
SUPT4H1-203ENST00000579289 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
SUPT4H1-203ENST00000579289 PCP4P48539 62 aa3.48□□□□□ -1.85
SUPT4H1-203ENST00000579289 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
SUPT4H1-203ENST00000579289 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
SUPT4H1-203ENST00000579289 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
SUPT4H1-203ENST00000579289 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
SUPT4H1-203ENST00000579289 ROMO1P60602 79 aa3.42□□□□□ -1.86
SUPT4H1-203ENST00000579289 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
SUPT4H1-203ENST00000579289 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
SUPT4H1-203ENST00000579289 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
SUPT4H1-203ENST00000579289 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
SUPT4H1-203ENST00000579289 MT1AP04731 61 aa3.3□□□□□ -1.88
SUPT4H1-203ENST00000579289 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
SUPT4H1-203ENST00000579289 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
SUPT4H1-203ENST00000579289 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
SUPT4H1-203ENST00000579289 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
SUPT4H1-203ENST00000579289 MT3P25713 68 aa3□□□□□ -1.93
SUPT4H1-203ENST00000579289 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
SUPT4H1-203ENST00000579289 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
SUPT4H1-203ENST00000579289 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
SUPT4H1-203ENST00000579289 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
SUPT4H1-203ENST00000579289 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
SUPT4H1-203ENST00000579289 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
SUPT4H1-203ENST00000579289 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
SUPT4H1-203ENST00000579289 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
SUPT4H1-203ENST00000579289 H3BS24 57 aa2.66□□□□□ -1.98
SUPT4H1-203ENST00000579289 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
SUPT4H1-203ENST00000579289 SVIPQ8NHG7 77 aa2.59□□□□□ -1.99
SUPT4H1-203ENST00000579289 LCE1FQ5T754 118 aa2.55□□□□□ -2
SUPT4H1-203ENST00000579289 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
SUPT4H1-203ENST00000579289 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SUPT4H1-203ENST00000579289 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SUPT4H1-203ENST00000579289 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
SUPT4H1-203ENST00000579289 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
SUPT4H1-203ENST00000579289 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
SUPT4H1-203ENST00000579289 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SUPT4H1-203ENST00000579289 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SUPT4H1-203ENST00000579289 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
SUPT4H1-203ENST00000579289 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SUPT4H1-203ENST00000579289 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
SUPT4H1-203ENST00000579289 PRM1P04553 51 aa1.76□□□□□ -2.13
SUPT4H1-203ENST00000579289 A0A0A0MQY5 61 aa1.68□□□□□ -2.14
SUPT4H1-203ENST00000579289 INE1O15225 51 aa1.48□□□□□ -2.17
SUPT4H1-203ENST00000579289 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms