RNA–Protein interactions for RNA: ENST00000578966.1

RPL17-203, Transcript of ribosomal protein L17, humanhuman

TSL 1 (best)

Gene RPL17, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL17-203ENST00000578966 ANK2Q01484 3957 aa0.73□□□□□ -2.29
RPL17-203ENST00000578966 LRP1BQ9NZR2 4599 aa0.73□□□□□ -2.29
RPL17-203ENST00000578966 LRP1Q07954 4544 aaKnown RBP0.73□□□□□ -2.29
RPL17-203ENST00000578966 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
RPL17-203ENST00000578966 KIAA1109Q2LD37 5005 aa0.73□□□□□ -2.29
RPL17-203ENST00000578966 HERC1Q15751 4861 aa0.72□□□□□ -2.29
RPL17-203ENST00000578966 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
RPL17-203ENST00000578966 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
RPL17-203ENST00000578966 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
RPL17-203ENST00000578966 PKD1P98161 4303 aa0.72□□□□□ -2.29
RPL17-203ENST00000578966 HECTD4Q9Y4D8 3996 aa0.71□□□□□ -2.3
RPL17-203ENST00000578966 MUC2Q02817 5179 aa0.71□□□□□ -2.3
RPL17-203ENST00000578966 FAT2Q9NYQ8 4349 aa0.71□□□□□ -2.3
RPL17-203ENST00000578966 LPAP08519 4548 aa0.71□□□□□ -2.3
RPL17-203ENST00000578966 HSPG2P98160 4391 aa0.71□□□□□ -2.3
RPL17-203ENST00000578966 FLGP20930 4061 aaPredicted RBP0.7□□□□□ -2.3
RPL17-203ENST00000578966 PKHD1L1Q86WI1 4243 aa0.7□□□□□ -2.3
RPL17-203ENST00000578966 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
RPL17-203ENST00000578966 M0R2T5 61 aa0.69□□□□□ -2.3
RPL17-203ENST00000578966 ABCA13Q86UQ4 5058 aa0.69□□□□□ -2.3
RPL17-203ENST00000578966 FAT1Q14517 4588 aa0.68□□□□□ -2.3
RPL17-203ENST00000578966 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
RPL17-203ENST00000578966 TNXBP22105 4242 aa0.67□□□□□ -2.3
RPL17-203ENST00000578966 VPS13BQ7Z7G8 4022 aa0.67□□□□□ -2.3
RPL17-203ENST00000578966 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
RPL17-203ENST00000578966 KMT2AQ03164 3969 aa0.66□□□□□ -2.3
RPL17-203ENST00000578966 PKHD1P08F94 4074 aa0.65□□□□□ -2.31
RPL17-203ENST00000578966 MUC17Q685J3 4493 aa0.64□□□□□ -2.31
RPL17-203ENST00000578966 SMR3BP02814 79 aaPredicted RBP0.64□□□□□ -2.31
RPL17-203ENST00000578966 FAT4Q6V0I7 4981 aa0.63□□□□□ -2.31
RPL17-203ENST00000578966 SPRR2GQ9BYE4 73 aa0.63□□□□□ -2.31
RPL17-203ENST00000578966 RNF213Q63HN8 5207 aa0.62□□□□□ -2.31
RPL17-203ENST00000578966 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
RPL17-203ENST00000578966 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
RPL17-203ENST00000578966 HMCN2Q8NDA2 5059 aa0.6□□□□□ -2.31
RPL17-203ENST00000578966 LRP2P98164 4655 aa0.59□□□□□ -2.31
RPL17-203ENST00000578966 MT1AP04731 61 aa0.59□□□□□ -2.31
RPL17-203ENST00000578966 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
RPL17-203ENST00000578966 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
RPL17-203ENST00000578966 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
RPL17-203ENST00000578966 KRTAP19-2Q3LHN2 52 aa0.58□□□□□ -2.32
RPL17-203ENST00000578966 KRTAP19-8Q3LI54 63 aa0.58□□□□□ -2.32
RPL17-203ENST00000578966 SSPOA2VEC9 5147 aa0.58□□□□□ -2.32
RPL17-203ENST00000578966 NEBP20929 6669 aa0.56□□□□□ -2.32
RPL17-203ENST00000578966 PRM1P04553 51 aa0.56□□□□□ -2.32
RPL17-203ENST00000578966 MT1EP04732 61 aa0.56□□□□□ -2.32
RPL17-203ENST00000578966 KRTAP20-1Q3LI63 56 aa0.56□□□□□ -2.32
RPL17-203ENST00000578966 MT1XP80297 61 aa0.55□□□□□ -2.32
RPL17-203ENST00000578966 MACF1Q9UPN3 7388 aaKnown RBP0.54□□□□□ -2.32
RPL17-203ENST00000578966 SYNE2Q8WXH0 6885 aaKnown RBP0.53□□□□□ -2.32
RPL17-203ENST00000578966 MT1LQ93083 61 aa0.53□□□□□ -2.32
RPL17-203ENST00000578966 MT1HL1P0DM35 61 aa0.52□□□□□ -2.33
RPL17-203ENST00000578966 SPRR2BP35325 72 aa0.52□□□□□ -2.33
RPL17-203ENST00000578966 SPRR2AP35326 72 aa0.52□□□□□ -2.33
RPL17-203ENST00000578966 KMT2DO14686 5537 aa0.51□□□□□ -2.33
RPL17-203ENST00000578966 MT1BP07438 61 aa0.51□□□□□ -2.33
RPL17-203ENST00000578966 SPRR2FQ96RM1 72 aa0.51□□□□□ -2.33
RPL17-203ENST00000578966 MUC12Q9UKN1 5478 aa0.5□□□□□ -2.33
RPL17-203ENST00000578966 SPRR2DP22532 72 aa0.5□□□□□ -2.33
RPL17-203ENST00000578966 MT1HP80294 61 aa0.5□□□□□ -2.33
RPL17-203ENST00000578966 USH2AO75445 5202 aa0.49□□□□□ -2.33
RPL17-203ENST00000578966 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
RPL17-203ENST00000578966 SPRR2EP22531 72 aa0.48□□□□□ -2.33
RPL17-203ENST00000578966 KRTAP6-2Q3LI66 62 aa0.48□□□□□ -2.33
RPL17-203ENST00000578966 KRTAP19-7Q3SYF9 63 aa0.48□□□□□ -2.33
RPL17-203ENST00000578966 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
RPL17-203ENST00000578966 MT2AP02795 61 aa0.47□□□□□ -2.33
RPL17-203ENST00000578966 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
RPL17-203ENST00000578966 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
RPL17-203ENST00000578966 MT1FP04733 61 aa0.45□□□□□ -2.34
RPL17-203ENST00000578966 MT1GP13640 62 aa0.44□□□□□ -2.34
RPL17-203ENST00000578966 MT1MQ8N339 61 aa0.44□□□□□ -2.34
RPL17-203ENST00000578966 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
RPL17-203ENST00000578966 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
RPL17-203ENST00000578966 KRTAP6-1Q3LI64 71 aa0.39□□□□□ -2.35
RPL17-203ENST00000578966 KRTAP19-6Q3LI70 58 aa0.39□□□□□ -2.35
RPL17-203ENST00000578966 MT4P47944 62 aa0.3□□□□□ -2.36
RPL17-203ENST00000578966 KRTAP20-2Q3LI61 65 aa0.26□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 6.8 ms