RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
GGA3-206ENST00000578773 LINC00643Q86TS7 51 aa3.24□□□□□ -1.89
GGA3-206ENST00000578773 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
GGA3-206ENST00000578773 MT1AP04731 61 aa3.22□□□□□ -1.89
GGA3-206ENST00000578773 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
GGA3-206ENST00000578773 SCGB1A1P11684 91 aa3.19□□□□□ -1.9
GGA3-206ENST00000578773 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
GGA3-206ENST00000578773 TNP1P09430 55 aa3.16□□□□□ -1.9
GGA3-206ENST00000578773 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
GGA3-206ENST00000578773 A0A1B0GU33 70 aa3.08□□□□□ -1.92
GGA3-206ENST00000578773 SEC61GP60059 68 aa3.08□□□□□ -1.92
GGA3-206ENST00000578773 LOC105371267A0A1B0GV96 52 aa3.07□□□□□ -1.92
GGA3-206ENST00000578773 SNURFQ9Y675 71 aa3.03□□□□□ -1.92
GGA3-206ENST00000578773 A8MU10 97 aa3.02□□□□□ -1.93
GGA3-206ENST00000578773 SMIM26A0A096LP01 95 aa2.97□□□□□ -1.93
GGA3-206ENST00000578773 COA5Q86WW8 74 aa2.96□□□□□ -1.94
GGA3-206ENST00000578773 SPANXA2-OT1Q8N9U9 137 aa2.96□□□□□ -1.94
GGA3-206ENST00000578773 PCP4L1A6NKN8 68 aa2.94□□□□□ -1.94
GGA3-206ENST00000578773 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
GGA3-206ENST00000578773 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
GGA3-206ENST00000578773 MT3P25713 68 aa2.92□□□□□ -1.94
GGA3-206ENST00000578773 SMIM20Q8N5G0 67 aa2.91□□□□□ -1.94
GGA3-206ENST00000578773 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
GGA3-206ENST00000578773 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
GGA3-206ENST00000578773 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
GGA3-206ENST00000578773 SERP2Q8N6R1 65 aa2.87□□□□□ -1.95
GGA3-206ENST00000578773 KRTAP19-4Q3LI73 84 aa2.85□□□□□ -1.95
GGA3-206ENST00000578773 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
GGA3-206ENST00000578773 A0A1B0GU69 56 aa2.83□□□□□ -1.96
GGA3-206ENST00000578773 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
GGA3-206ENST00000578773 J3QR89 54 aa2.81□□□□□ -1.96
GGA3-206ENST00000578773 KRTAP15-1Q3LI76 137 aa2.81□□□□□ -1.96
GGA3-206ENST00000578773 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
GGA3-206ENST00000578773 A0A1B0GV90 55 aa2.72□□□□□ -1.97
GGA3-206ENST00000578773 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
GGA3-206ENST00000578773 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
GGA3-206ENST00000578773 SVIPQ8NHG7 77 aa2.61□□□□□ -1.99
GGA3-206ENST00000578773 PRR15LQ9BU68 103 aa2.61□□□□□ -1.99
GGA3-206ENST00000578773 H7BZZ5 65 aa2.59□□□□□ -1.99
GGA3-206ENST00000578773 KRTAP23-1A1A580 65 aa2.56□□□□□ -2
GGA3-206ENST00000578773 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
GGA3-206ENST00000578773 K7ERU9 68 aa2.49□□□□□ -2.01
GGA3-206ENST00000578773 UQCR11O14957 56 aa2.49□□□□□ -2.01
GGA3-206ENST00000578773 COX7CP15954 63 aa2.49□□□□□ -2.01
GGA3-206ENST00000578773 H3BS24 57 aa2.47□□□□□ -2.01
GGA3-206ENST00000578773 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
GGA3-206ENST00000578773 K7ERS5 55 aa2.44□□□□□ -2.02
GGA3-206ENST00000578773 MIR22HGQ0VDD5 57 aa2.42□□□□□ -2.02
GGA3-206ENST00000578773 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
GGA3-206ENST00000578773 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
GGA3-206ENST00000578773 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
GGA3-206ENST00000578773 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
GGA3-206ENST00000578773 Q1T7F1 81 aa2.21□□□□□ -2.06
GGA3-206ENST00000578773 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
GGA3-206ENST00000578773 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
GGA3-206ENST00000578773 PCP4P48539 62 aa2.19□□□□□ -2.06
GGA3-206ENST00000578773 ROMO1P60602 79 aa2.19□□□□□ -2.06
GGA3-206ENST00000578773 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
GGA3-206ENST00000578773 CCDC179H3BU77 68 aa2.18□□□□□ -2.06
GGA3-206ENST00000578773 ANAPC13Q9BS18 74 aa2.17□□□□□ -2.06
GGA3-206ENST00000578773 PSPHP1O15172 72 aa2.16□□□□□ -2.06
GGA3-206ENST00000578773 A0A0A0MQY5 61 aa2.1□□□□□ -2.07
GGA3-206ENST00000578773 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
GGA3-206ENST00000578773 A6NED7 52 aa2.03□□□□□ -2.08
GGA3-206ENST00000578773 TMEM258P61165 79 aa2□□□□□ -2.09
GGA3-206ENST00000578773 LCE3DQ9BYE3 92 aa1.98□□□□□ -2.09
GGA3-206ENST00000578773 V9GYY9 64 aa1.98□□□□□ -2.09
GGA3-206ENST00000578773 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
GGA3-206ENST00000578773 PRAC1Q96KF2 57 aa1.74□□□□□ -2.13
GGA3-206ENST00000578773 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
GGA3-206ENST00000578773 NDUFAF8A1L188 74 aa1.52□□□□□ -2.17
GGA3-206ENST00000578773 PRO0628Q9UI54 55 aa1.39□□□□□ -2.19
GGA3-206ENST00000578773 LUZP6Q538Z0 58 aa1.33□□□□□ -2.2
GGA3-206ENST00000578773 PMAIP1Q13794 54 aa1.25□□□□□ -2.21
GGA3-206ENST00000578773 BRK1Q8WUW1 75 aa1.25□□□□□ -2.21
GGA3-206ENST00000578773 PRM1P04553 51 aa1.13□□□□□ -2.23
GGA3-206ENST00000578773 KTN1-AS1Q86SY8 53 aa1.1□□□□□ -2.23
GGA3-206ENST00000578773 INE1O15225 51 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 96 ms