RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 MT1LQ93083 61 aa8.18□□□□□ -1.1
VAPA-205ENST00000578314 MT1MQ8N339 61 aa8.14□□□□□ -1.11
VAPA-205ENST00000578314 V9GYY9 64 aa8.08□□□□□ -1.12
VAPA-205ENST00000578314 LCE1DQ5T752 114 aa8.03□□□□□ -1.12
VAPA-205ENST00000578314 MIR22HGQ0VDD5 57 aa8□□□□□ -1.13
VAPA-205ENST00000578314 Q1T7F1 81 aa7.98□□□□□ -1.13
VAPA-205ENST00000578314 PSPHP1O15172 72 aa7.96□□□□□ -1.14
VAPA-205ENST00000578314 LCE4AQ5TA78 99 aa7.96□□□□□ -1.14
VAPA-205ENST00000578314 HMCN1Q96RW7 5635 aa7.96□□□□□ -1.14
VAPA-205ENST00000578314 KRTAP4-3Q9BYR4 195 aa7.94□□□□□ -1.14
VAPA-205ENST00000578314 MT4P47944 62 aa7.91□□□□□ -1.14
VAPA-205ENST00000578314 KRTAP12-3P60328 96 aa7.9□□□□□ -1.14
VAPA-205ENST00000578314 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
VAPA-205ENST00000578314 K7ERS5 55 aa7.87□□□□□ -1.15
VAPA-205ENST00000578314 KRTAP5-4Q6L8H1 288 aa7.8□□□□□ -1.16
VAPA-205ENST00000578314 KRTAP25-1Q3LHN0 102 aa7.79□□□□□ -1.16
VAPA-205ENST00000578314 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
VAPA-205ENST00000578314 A6NED7 52 aa7.74□□□□□ -1.17
VAPA-205ENST00000578314 AHNAK2Q8IVF2 5795 aa7.73□□□□□ -1.17
VAPA-205ENST00000578314 KRTAP4-6Q9BYQ5 205 aa7.66□□□□□ -1.18
VAPA-205ENST00000578314 KRTAP5-10Q6L8G5 202 aa7.57□□□□□ -1.2
VAPA-205ENST00000578314 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
VAPA-205ENST00000578314 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
VAPA-205ENST00000578314 KRTAP5-5Q701N2 237 aaPredicted RBP7.5□□□□□ -1.21
VAPA-205ENST00000578314 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
VAPA-205ENST00000578314 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
VAPA-205ENST00000578314 KRTAP20-2Q3LI61 65 aa7.36□□□□□ -1.23
VAPA-205ENST00000578314 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
VAPA-205ENST00000578314 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
VAPA-205ENST00000578314 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
VAPA-205ENST00000578314 ROMO1P60602 79 aa7.32□□□□□ -1.24
VAPA-205ENST00000578314 KRTAP5-7Q6L8G8 165 aa7.3□□□□□ -1.24
VAPA-205ENST00000578314 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
VAPA-205ENST00000578314 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
VAPA-205ENST00000578314 SYNE1Q8NF91 8797 aaKnown RBP7.19□□□□□ -1.26
VAPA-205ENST00000578314 BRK1Q8WUW1 75 aa7.12□□□□□ -1.27
VAPA-205ENST00000578314 MT1AP04731 61 aa6.96□□□□□ -1.3
VAPA-205ENST00000578314 KRTAP6-1Q3LI64 71 aa6.91□□□□□ -1.3
VAPA-205ENST00000578314 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
VAPA-205ENST00000578314 KRTAP5-2Q701N4 177 aa6.83□□□□□ -1.32
VAPA-205ENST00000578314 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
VAPA-205ENST00000578314 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
VAPA-205ENST00000578314 PMAIP1Q13794 54 aa6.71□□□□□ -1.34
VAPA-205ENST00000578314 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
VAPA-205ENST00000578314 KRTAP6-2Q3LI66 62 aa6.6□□□□□ -1.35
VAPA-205ENST00000578314 KRTAP5-8O75690 187 aa6.55□□□□□ -1.36
VAPA-205ENST00000578314 OBSCNQ5VST9 7968 aa6.43□□□□□ -1.38
VAPA-205ENST00000578314 AHNAKQ09666 5890 aaKnown RBP6.41□□□□□ -1.38
VAPA-205ENST00000578314 MUC5BQ9HC84 5762 aaPredicted RBP6.4□□□□□ -1.38
VAPA-205ENST00000578314 MUC5ACP98088 5654 aa6.38□□□□□ -1.39
VAPA-205ENST00000578314 MT3P25713 68 aa6.38□□□□□ -1.39
VAPA-205ENST00000578314 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
VAPA-205ENST00000578314 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
VAPA-205ENST00000578314 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
VAPA-205ENST00000578314 KRTAP5-1Q6L8H4 278 aa6.13□□□□□ -1.43
VAPA-205ENST00000578314 SVIPQ8NHG7 77 aa6□□□□□ -1.45
VAPA-205ENST00000578314 LCE1EQ5T753 118 aa5.88□□□□□ -1.47
VAPA-205ENST00000578314 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
VAPA-205ENST00000578314 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
VAPA-205ENST00000578314 LCE1CQ5T751 118 aa5.45□□□□□ -1.54
VAPA-205ENST00000578314 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
VAPA-205ENST00000578314 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
VAPA-205ENST00000578314 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
VAPA-205ENST00000578314 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
VAPA-205ENST00000578314 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
VAPA-205ENST00000578314 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
VAPA-205ENST00000578314 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
VAPA-205ENST00000578314 NDUFAF8A1L188 74 aa4.79□□□□□ -1.64
VAPA-205ENST00000578314 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
VAPA-205ENST00000578314 PHGR1C9JFL3 82 aa4.41□□□□□ -1.7
VAPA-205ENST00000578314 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
VAPA-205ENST00000578314 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
VAPA-205ENST00000578314 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
VAPA-205ENST00000578314 INE1O15225 51 aa3.92□□□□□ -1.78
VAPA-205ENST00000578314 PRM1P04553 51 aa3.75□□□□□ -1.81
VAPA-205ENST00000578314 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
VAPA-205ENST00000578314 H3BS24 57 aa3.35□□□□□ -1.87
VAPA-205ENST00000578314 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms