RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
NUP85-207ENST00000578294 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
NUP85-207ENST00000578294 K7ERS5 55 aa4.68□□□□□ -1.66
NUP85-207ENST00000578294 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
NUP85-207ENST00000578294 A6NED7 52 aa4.62□□□□□ -1.67
NUP85-207ENST00000578294 MT1LQ93083 61 aa4.62□□□□□ -1.67
NUP85-207ENST00000578294 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.67
NUP85-207ENST00000578294 MT1MQ8N339 61 aa4.59□□□□□ -1.67
NUP85-207ENST00000578294 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
NUP85-207ENST00000578294 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
NUP85-207ENST00000578294 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
NUP85-207ENST00000578294 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
NUP85-207ENST00000578294 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
NUP85-207ENST00000578294 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
NUP85-207ENST00000578294 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
NUP85-207ENST00000578294 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
NUP85-207ENST00000578294 ROMO1P60602 79 aa4.35□□□□□ -1.71
NUP85-207ENST00000578294 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
NUP85-207ENST00000578294 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
NUP85-207ENST00000578294 MT4P47944 62 aa4.32□□□□□ -1.72
NUP85-207ENST00000578294 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
NUP85-207ENST00000578294 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
NUP85-207ENST00000578294 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
NUP85-207ENST00000578294 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
NUP85-207ENST00000578294 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
NUP85-207ENST00000578294 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
NUP85-207ENST00000578294 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
NUP85-207ENST00000578294 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
NUP85-207ENST00000578294 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
NUP85-207ENST00000578294 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
NUP85-207ENST00000578294 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
NUP85-207ENST00000578294 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
NUP85-207ENST00000578294 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
NUP85-207ENST00000578294 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
NUP85-207ENST00000578294 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
NUP85-207ENST00000578294 MT1AP04731 61 aa3.95□□□□□ -1.78
NUP85-207ENST00000578294 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
NUP85-207ENST00000578294 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
NUP85-207ENST00000578294 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
NUP85-207ENST00000578294 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
NUP85-207ENST00000578294 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
NUP85-207ENST00000578294 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
NUP85-207ENST00000578294 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
NUP85-207ENST00000578294 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
NUP85-207ENST00000578294 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
NUP85-207ENST00000578294 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
NUP85-207ENST00000578294 MT3P25713 68 aa3.64□□□□□ -1.83
NUP85-207ENST00000578294 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
NUP85-207ENST00000578294 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
NUP85-207ENST00000578294 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
NUP85-207ENST00000578294 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
NUP85-207ENST00000578294 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
NUP85-207ENST00000578294 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
NUP85-207ENST00000578294 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
NUP85-207ENST00000578294 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
NUP85-207ENST00000578294 MUC5ACP98088 5654 aa3.37□□□□□ -1.87
NUP85-207ENST00000578294 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
NUP85-207ENST00000578294 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
NUP85-207ENST00000578294 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
NUP85-207ENST00000578294 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
NUP85-207ENST00000578294 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
NUP85-207ENST00000578294 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
NUP85-207ENST00000578294 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
NUP85-207ENST00000578294 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
NUP85-207ENST00000578294 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
NUP85-207ENST00000578294 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
NUP85-207ENST00000578294 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
NUP85-207ENST00000578294 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
NUP85-207ENST00000578294 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
NUP85-207ENST00000578294 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
NUP85-207ENST00000578294 H3BS24 57 aa2.3□□□□□ -2.04
NUP85-207ENST00000578294 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
NUP85-207ENST00000578294 PRM1P04553 51 aa2.28□□□□□ -2.04
NUP85-207ENST00000578294 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
NUP85-207ENST00000578294 A0A0A0MQY5 61 aa2.14□□□□□ -2.07
NUP85-207ENST00000578294 INE1O15225 51 aa2.13□□□□□ -2.07
NUP85-207ENST00000578294 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
NUP85-207ENST00000578294 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 163.9 ms