RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC8-204ENST00000578252 MT1XP80297 61 aa4.66□□□□□ -1.66
TRAPPC8-204ENST00000578252 K7ERS5 55 aa4.64□□□□□ -1.67
TRAPPC8-204ENST00000578252 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
TRAPPC8-204ENST00000578252 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
TRAPPC8-204ENST00000578252 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
TRAPPC8-204ENST00000578252 ROMO1P60602 79 aa4.46□□□□□ -1.7
TRAPPC8-204ENST00000578252 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
TRAPPC8-204ENST00000578252 TNP1P09430 55 aa4.43□□□□□ -1.7
TRAPPC8-204ENST00000578252 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
TRAPPC8-204ENST00000578252 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
TRAPPC8-204ENST00000578252 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
TRAPPC8-204ENST00000578252 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
TRAPPC8-204ENST00000578252 KRTAP8-1Q8IUC2 63 aa4.34□□□□□ -1.71
TRAPPC8-204ENST00000578252 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
TRAPPC8-204ENST00000578252 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
TRAPPC8-204ENST00000578252 KMT2DO14686 5537 aa4.3□□□□□ -1.72
TRAPPC8-204ENST00000578252 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
TRAPPC8-204ENST00000578252 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
TRAPPC8-204ENST00000578252 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
TRAPPC8-204ENST00000578252 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
TRAPPC8-204ENST00000578252 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
TRAPPC8-204ENST00000578252 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
TRAPPC8-204ENST00000578252 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TRAPPC8-204ENST00000578252 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
TRAPPC8-204ENST00000578252 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.75
TRAPPC8-204ENST00000578252 MT1EP04732 61 aa4.12□□□□□ -1.75
TRAPPC8-204ENST00000578252 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
TRAPPC8-204ENST00000578252 KRTAP12-3P60328 96 aa4.1□□□□□ -1.75
TRAPPC8-204ENST00000578252 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
TRAPPC8-204ENST00000578252 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
TRAPPC8-204ENST00000578252 SPRR2EP22531 72 aa4.08□□□□□ -1.76
TRAPPC8-204ENST00000578252 SPRR2BP35325 72 aa4.08□□□□□ -1.76
TRAPPC8-204ENST00000578252 SPRR2AP35326 72 aa4.08□□□□□ -1.76
TRAPPC8-204ENST00000578252 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
TRAPPC8-204ENST00000578252 NEBP20929 6669 aa4.04□□□□□ -1.76
TRAPPC8-204ENST00000578252 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
TRAPPC8-204ENST00000578252 MT1LQ93083 61 aa4□□□□□ -1.77
TRAPPC8-204ENST00000578252 MT1GP13640 62 aa3.97□□□□□ -1.77
TRAPPC8-204ENST00000578252 SPRR2DP22532 72 aa3.94□□□□□ -1.78
TRAPPC8-204ENST00000578252 MT1MQ8N339 61 aa3.9□□□□□ -1.79
TRAPPC8-204ENST00000578252 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TRAPPC8-204ENST00000578252 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
TRAPPC8-204ENST00000578252 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
TRAPPC8-204ENST00000578252 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
TRAPPC8-204ENST00000578252 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
TRAPPC8-204ENST00000578252 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
TRAPPC8-204ENST00000578252 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
TRAPPC8-204ENST00000578252 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
TRAPPC8-204ENST00000578252 INE1O15225 51 aa3.58□□□□□ -1.84
TRAPPC8-204ENST00000578252 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
TRAPPC8-204ENST00000578252 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
TRAPPC8-204ENST00000578252 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC8-204ENST00000578252 MT1AP04731 61 aa3.42□□□□□ -1.86
TRAPPC8-204ENST00000578252 MT4P47944 62 aa3.39□□□□□ -1.87
TRAPPC8-204ENST00000578252 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
TRAPPC8-204ENST00000578252 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
TRAPPC8-204ENST00000578252 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
TRAPPC8-204ENST00000578252 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
TRAPPC8-204ENST00000578252 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
TRAPPC8-204ENST00000578252 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
TRAPPC8-204ENST00000578252 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
TRAPPC8-204ENST00000578252 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
TRAPPC8-204ENST00000578252 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
TRAPPC8-204ENST00000578252 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
TRAPPC8-204ENST00000578252 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
TRAPPC8-204ENST00000578252 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
TRAPPC8-204ENST00000578252 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
TRAPPC8-204ENST00000578252 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
TRAPPC8-204ENST00000578252 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
TRAPPC8-204ENST00000578252 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
TRAPPC8-204ENST00000578252 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
TRAPPC8-204ENST00000578252 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
TRAPPC8-204ENST00000578252 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
TRAPPC8-204ENST00000578252 PRM1P04553 51 aa2.22□□□□□ -2.05
TRAPPC8-204ENST00000578252 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
TRAPPC8-204ENST00000578252 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TRAPPC8-204ENST00000578252 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 58.9 ms