RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 MT1GP13640 62 aa4.19□□□□□ -1.74
GGA3-204ENST00000578208 MT1LQ93083 61 aa4.14□□□□□ -1.75
GGA3-204ENST00000578208 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
GGA3-204ENST00000578208 A6NED7 52 aa4.11□□□□□ -1.75
GGA3-204ENST00000578208 MT1MQ8N339 61 aa4.11□□□□□ -1.75
GGA3-204ENST00000578208 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
GGA3-204ENST00000578208 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
GGA3-204ENST00000578208 PCP4P48539 62 aa4.06□□□□□ -1.76
GGA3-204ENST00000578208 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
GGA3-204ENST00000578208 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
GGA3-204ENST00000578208 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
GGA3-204ENST00000578208 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
GGA3-204ENST00000578208 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
GGA3-204ENST00000578208 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
GGA3-204ENST00000578208 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
GGA3-204ENST00000578208 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
GGA3-204ENST00000578208 ROMO1P60602 79 aa3.9□□□□□ -1.79
GGA3-204ENST00000578208 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
GGA3-204ENST00000578208 MT4P47944 62 aa3.88□□□□□ -1.79
GGA3-204ENST00000578208 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
GGA3-204ENST00000578208 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
GGA3-204ENST00000578208 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
GGA3-204ENST00000578208 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
GGA3-204ENST00000578208 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
GGA3-204ENST00000578208 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
GGA3-204ENST00000578208 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
GGA3-204ENST00000578208 LOC100996750A0A140TA64 210 aa3.7□□□□□ -1.82
GGA3-204ENST00000578208 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
GGA3-204ENST00000578208 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
GGA3-204ENST00000578208 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
GGA3-204ENST00000578208 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
GGA3-204ENST00000578208 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
GGA3-204ENST00000578208 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
GGA3-204ENST00000578208 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
GGA3-204ENST00000578208 MT1AP04731 61 aa3.53□□□□□ -1.84
GGA3-204ENST00000578208 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
GGA3-204ENST00000578208 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
GGA3-204ENST00000578208 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
GGA3-204ENST00000578208 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
GGA3-204ENST00000578208 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
GGA3-204ENST00000578208 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
GGA3-204ENST00000578208 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
GGA3-204ENST00000578208 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
GGA3-204ENST00000578208 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
GGA3-204ENST00000578208 MT3P25713 68 aa3.25□□□□□ -1.89
GGA3-204ENST00000578208 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
GGA3-204ENST00000578208 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
GGA3-204ENST00000578208 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
GGA3-204ENST00000578208 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
GGA3-204ENST00000578208 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
GGA3-204ENST00000578208 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
GGA3-204ENST00000578208 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
GGA3-204ENST00000578208 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
GGA3-204ENST00000578208 SVIPQ8NHG7 77 aa2.96□□□□□ -1.94
GGA3-204ENST00000578208 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
GGA3-204ENST00000578208 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
GGA3-204ENST00000578208 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
GGA3-204ENST00000578208 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
GGA3-204ENST00000578208 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
GGA3-204ENST00000578208 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
GGA3-204ENST00000578208 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
GGA3-204ENST00000578208 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
GGA3-204ENST00000578208 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
GGA3-204ENST00000578208 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
GGA3-204ENST00000578208 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
GGA3-204ENST00000578208 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
GGA3-204ENST00000578208 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
GGA3-204ENST00000578208 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
GGA3-204ENST00000578208 NDUFAF8A1L188 74 aa2.24□□□□□ -2.05
GGA3-204ENST00000578208 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
GGA3-204ENST00000578208 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
GGA3-204ENST00000578208 H3BS24 57 aa2.04□□□□□ -2.08
GGA3-204ENST00000578208 PRM1P04553 51 aa1.99□□□□□ -2.09
GGA3-204ENST00000578208 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
GGA3-204ENST00000578208 A0A0A0MQY5 61 aa1.84□□□□□ -2.11
GGA3-204ENST00000578208 INE1O15225 51 aa1.83□□□□□ -2.12
GGA3-204ENST00000578208 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
GGA3-204ENST00000578208 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 103.5 ms