RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
PPP4R1-208ENST00000578178 SMIM26A0A096LP01 95 aa4.14□□□□□ -1.75
PPP4R1-208ENST00000578178 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
PPP4R1-208ENST00000578178 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
PPP4R1-208ENST00000578178 A8MU10 97 aa4.1□□□□□ -1.75
PPP4R1-208ENST00000578178 PRR15LQ9BU68 103 aa4.09□□□□□ -1.75
PPP4R1-208ENST00000578178 MT1EP04732 61 aa4.08□□□□□ -1.76
PPP4R1-208ENST00000578178 TMEM258P61165 79 aa4.05□□□□□ -1.76
PPP4R1-208ENST00000578178 PSPHP1O15172 72 aa4.04□□□□□ -1.76
PPP4R1-208ENST00000578178 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
PPP4R1-208ENST00000578178 KRTAP19-3Q7Z4W3 81 aa4.04□□□□□ -1.76
PPP4R1-208ENST00000578178 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
PPP4R1-208ENST00000578178 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
PPP4R1-208ENST00000578178 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
PPP4R1-208ENST00000578178 LCE4AQ5TA78 99 aa4□□□□□ -1.77
PPP4R1-208ENST00000578178 TNP1P09430 55 aa3.98□□□□□ -1.77
PPP4R1-208ENST00000578178 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
PPP4R1-208ENST00000578178 UQCR11O14957 56 aa3.94□□□□□ -1.78
PPP4R1-208ENST00000578178 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
PPP4R1-208ENST00000578178 MT1GP13640 62 aa3.93□□□□□ -1.78
PPP4R1-208ENST00000578178 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
PPP4R1-208ENST00000578178 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
PPP4R1-208ENST00000578178 MT1LQ93083 61 aa3.9□□□□□ -1.79
PPP4R1-208ENST00000578178 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
PPP4R1-208ENST00000578178 MT1MQ8N339 61 aa3.88□□□□□ -1.79
PPP4R1-208ENST00000578178 MIR22HGQ0VDD5 57 aa3.85□□□□□ -1.79
PPP4R1-208ENST00000578178 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
PPP4R1-208ENST00000578178 K7ERS5 55 aa3.79□□□□□ -1.8
PPP4R1-208ENST00000578178 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
PPP4R1-208ENST00000578178 Q1T7F1 81 aa3.78□□□□□ -1.8
PPP4R1-208ENST00000578178 KRTAP25-1Q3LHN0 102 aa3.77□□□□□ -1.81
PPP4R1-208ENST00000578178 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
PPP4R1-208ENST00000578178 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
PPP4R1-208ENST00000578178 MT4P47944 62 aa3.69□□□□□ -1.82
PPP4R1-208ENST00000578178 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
PPP4R1-208ENST00000578178 A6NED7 52 aa3.67□□□□□ -1.82
PPP4R1-208ENST00000578178 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
PPP4R1-208ENST00000578178 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
PPP4R1-208ENST00000578178 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
PPP4R1-208ENST00000578178 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
PPP4R1-208ENST00000578178 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
PPP4R1-208ENST00000578178 ROMO1P60602 79 aa3.53□□□□□ -1.84
PPP4R1-208ENST00000578178 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
PPP4R1-208ENST00000578178 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
PPP4R1-208ENST00000578178 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
PPP4R1-208ENST00000578178 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
PPP4R1-208ENST00000578178 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
PPP4R1-208ENST00000578178 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
PPP4R1-208ENST00000578178 MT3P25713 68 aa3.44□□□□□ -1.86
PPP4R1-208ENST00000578178 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
PPP4R1-208ENST00000578178 MT1AP04731 61 aa3.33□□□□□ -1.88
PPP4R1-208ENST00000578178 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
PPP4R1-208ENST00000578178 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
PPP4R1-208ENST00000578178 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
PPP4R1-208ENST00000578178 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
PPP4R1-208ENST00000578178 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
PPP4R1-208ENST00000578178 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
PPP4R1-208ENST00000578178 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
PPP4R1-208ENST00000578178 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
PPP4R1-208ENST00000578178 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
PPP4R1-208ENST00000578178 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
PPP4R1-208ENST00000578178 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
PPP4R1-208ENST00000578178 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
PPP4R1-208ENST00000578178 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-208ENST00000578178 INE1O15225 51 aa2.79□□□□□ -1.96
PPP4R1-208ENST00000578178 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
PPP4R1-208ENST00000578178 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
PPP4R1-208ENST00000578178 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
PPP4R1-208ENST00000578178 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
PPP4R1-208ENST00000578178 LCE1CQ5T751 118 aa2.58□□□□□ -2
PPP4R1-208ENST00000578178 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
PPP4R1-208ENST00000578178 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
PPP4R1-208ENST00000578178 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
PPP4R1-208ENST00000578178 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PPP4R1-208ENST00000578178 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
PPP4R1-208ENST00000578178 PRM1P04553 51 aa1.81□□□□□ -2.12
PPP4R1-208ENST00000578178 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
PPP4R1-208ENST00000578178 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms