RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 RPS28P62857 69 aaKnown RBP8.03□□□□□ -1.12
SMARCD2-206ENST00000577990 DSTQ03001 7570 aaKnown RBP8□□□□□ -1.13
SMARCD2-206ENST00000577990 A6NED7 52 aa7.98□□□□□ -1.13
SMARCD2-206ENST00000577990 MT1GP13640 62 aa7.96□□□□□ -1.14
SMARCD2-206ENST00000577990 MT1LQ93083 61 aa7.92□□□□□ -1.14
SMARCD2-206ENST00000577990 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
SMARCD2-206ENST00000577990 PP632Q6XCG6 107 aa7.89□□□□□ -1.15
SMARCD2-206ENST00000577990 MT1MQ8N339 61 aa7.83□□□□□ -1.16
SMARCD2-206ENST00000577990 KRTAP4-9Q9BYQ8 210 aa7.83□□□□□ -1.16
SMARCD2-206ENST00000577990 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
SMARCD2-206ENST00000577990 GPR98Q8WXG9 6306 aa7.75□□□□□ -1.17
SMARCD2-206ENST00000577990 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
SMARCD2-206ENST00000577990 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
SMARCD2-206ENST00000577990 KRTAP4-3Q9BYR4 195 aa7.62□□□□□ -1.19
SMARCD2-206ENST00000577990 LCE1DQ5T752 114 aa7.61□□□□□ -1.19
SMARCD2-206ENST00000577990 ROMO1P60602 79 aa7.56□□□□□ -1.2
SMARCD2-206ENST00000577990 HMCN1Q96RW7 5635 aa7.54□□□□□ -1.2
SMARCD2-206ENST00000577990 MT4P47944 62 aa7.53□□□□□ -1.2
SMARCD2-206ENST00000577990 KRTAP4-7Q9BYR0 210 aa7.53□□□□□ -1.2
SMARCD2-206ENST00000577990 LCE4AQ5TA78 99 aa7.51□□□□□ -1.21
SMARCD2-206ENST00000577990 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
SMARCD2-206ENST00000577990 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
SMARCD2-206ENST00000577990 KRTAP5-4Q6L8H1 288 aa7.37□□□□□ -1.23
SMARCD2-206ENST00000577990 AHNAK2Q8IVF2 5795 aa7.34□□□□□ -1.23
SMARCD2-206ENST00000577990 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
SMARCD2-206ENST00000577990 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
SMARCD2-206ENST00000577990 KRTAP5-5Q701N2 237 aaPredicted RBP7.15□□□□□ -1.26
SMARCD2-206ENST00000577990 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
SMARCD2-206ENST00000577990 KRTAP5-10Q6L8G5 202 aa7.12□□□□□ -1.27
SMARCD2-206ENST00000577990 BRK1Q8WUW1 75 aa7.1□□□□□ -1.27
SMARCD2-206ENST00000577990 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
SMARCD2-206ENST00000577990 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
SMARCD2-206ENST00000577990 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
SMARCD2-206ENST00000577990 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
SMARCD2-206ENST00000577990 SYNE1Q8NF91 8797 aaKnown RBP6.86□□□□□ -1.31
SMARCD2-206ENST00000577990 KRTAP5-7Q6L8G8 165 aa6.83□□□□□ -1.32
SMARCD2-206ENST00000577990 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
SMARCD2-206ENST00000577990 MT1AP04731 61 aa6.75□□□□□ -1.33
SMARCD2-206ENST00000577990 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
SMARCD2-206ENST00000577990 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
SMARCD2-206ENST00000577990 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
SMARCD2-206ENST00000577990 KRTAP5-2Q701N4 177 aa6.46□□□□□ -1.38
SMARCD2-206ENST00000577990 PRAC1Q96KF2 57 aa6.4□□□□□ -1.38
SMARCD2-206ENST00000577990 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
SMARCD2-206ENST00000577990 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
SMARCD2-206ENST00000577990 KRTAP6-2Q3LI66 62 aa6.34□□□□□ -1.39
SMARCD2-206ENST00000577990 KRTAP5-8O75690 187 aa6.2□□□□□ -1.42
SMARCD2-206ENST00000577990 MT3P25713 68 aa6.16□□□□□ -1.42
SMARCD2-206ENST00000577990 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
SMARCD2-206ENST00000577990 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
SMARCD2-206ENST00000577990 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
SMARCD2-206ENST00000577990 MUC5ACP98088 5654 aa6.03□□□□□ -1.44
SMARCD2-206ENST00000577990 MUC5BQ9HC84 5762 aaPredicted RBP6.03□□□□□ -1.44
SMARCD2-206ENST00000577990 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
SMARCD2-206ENST00000577990 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
SMARCD2-206ENST00000577990 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
SMARCD2-206ENST00000577990 LCE1EQ5T753 118 aa5.59□□□□□ -1.51
SMARCD2-206ENST00000577990 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
SMARCD2-206ENST00000577990 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
SMARCD2-206ENST00000577990 LCE1BQ5T7P3 118 aa5.25□□□□□ -1.57
SMARCD2-206ENST00000577990 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
SMARCD2-206ENST00000577990 LCE1CQ5T751 118 aa5.18□□□□□ -1.58
SMARCD2-206ENST00000577990 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
SMARCD2-206ENST00000577990 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
SMARCD2-206ENST00000577990 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SMARCD2-206ENST00000577990 KRTAP5-11Q6L8G4 156 aa4.68□□□□□ -1.66
SMARCD2-206ENST00000577990 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
SMARCD2-206ENST00000577990 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
SMARCD2-206ENST00000577990 KRTAP21-2Q3LI59 83 aa4.39□□□□□ -1.71
SMARCD2-206ENST00000577990 PHGR1C9JFL3 82 aa4.16□□□□□ -1.74
SMARCD2-206ENST00000577990 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
SMARCD2-206ENST00000577990 PRM1P04553 51 aa3.89□□□□□ -1.79
SMARCD2-206ENST00000577990 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SMARCD2-206ENST00000577990 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
SMARCD2-206ENST00000577990 INE1O15225 51 aa3.64□□□□□ -1.83
SMARCD2-206ENST00000577990 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
SMARCD2-206ENST00000577990 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
SMARCD2-206ENST00000577990 H3BS24 57 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms