RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 KRTAP25-1Q3LHN0 102 aa4.81□□□□□ -1.64
MKS1-206ENST00000577824 NEBP20929 6669 aa4.81□□□□□ -1.64
MKS1-206ENST00000577824 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
MKS1-206ENST00000577824 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
MKS1-206ENST00000577824 ROMO1P60602 79 aa4.74□□□□□ -1.65
MKS1-206ENST00000577824 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
MKS1-206ENST00000577824 LCE1AQ5T7P2 110 aa4.72□□□□□ -1.65
MKS1-206ENST00000577824 MT1EP04732 61 aa4.71□□□□□ -1.66
MKS1-206ENST00000577824 KRTAP19-5Q3LI72 72 aa4.7□□□□□ -1.66
MKS1-206ENST00000577824 SPRR2EP22531 72 aa4.69□□□□□ -1.66
MKS1-206ENST00000577824 SPRR2BP35325 72 aa4.69□□□□□ -1.66
MKS1-206ENST00000577824 SPRR2AP35326 72 aa4.69□□□□□ -1.66
MKS1-206ENST00000577824 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
MKS1-206ENST00000577824 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
MKS1-206ENST00000577824 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
MKS1-206ENST00000577824 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
MKS1-206ENST00000577824 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
MKS1-206ENST00000577824 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
MKS1-206ENST00000577824 PP632Q6XCG6 107 aa4.56□□□□□ -1.68
MKS1-206ENST00000577824 MT1LQ93083 61 aa4.55□□□□□ -1.68
MKS1-206ENST00000577824 SPRR2DP22532 72 aa4.53□□□□□ -1.68
MKS1-206ENST00000577824 MT1GP13640 62 aa4.52□□□□□ -1.69
MKS1-206ENST00000577824 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
MKS1-206ENST00000577824 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
MKS1-206ENST00000577824 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
MKS1-206ENST00000577824 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
MKS1-206ENST00000577824 MT1MQ8N339 61 aa4.45□□□□□ -1.7
MKS1-206ENST00000577824 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
MKS1-206ENST00000577824 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
MKS1-206ENST00000577824 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
MKS1-206ENST00000577824 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
MKS1-206ENST00000577824 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
MKS1-206ENST00000577824 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
MKS1-206ENST00000577824 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
MKS1-206ENST00000577824 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
MKS1-206ENST00000577824 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
MKS1-206ENST00000577824 MT3P25713 68 aa4.18□□□□□ -1.74
MKS1-206ENST00000577824 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
MKS1-206ENST00000577824 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
MKS1-206ENST00000577824 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
MKS1-206ENST00000577824 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
MKS1-206ENST00000577824 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
MKS1-206ENST00000577824 MT4P47944 62 aa3.9□□□□□ -1.79
MKS1-206ENST00000577824 MT1AP04731 61 aa3.88□□□□□ -1.79
MKS1-206ENST00000577824 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
MKS1-206ENST00000577824 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
MKS1-206ENST00000577824 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
MKS1-206ENST00000577824 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
MKS1-206ENST00000577824 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
MKS1-206ENST00000577824 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
MKS1-206ENST00000577824 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
MKS1-206ENST00000577824 AHNAK2Q8IVF2 5795 aa3.7□□□□□ -1.82
MKS1-206ENST00000577824 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
MKS1-206ENST00000577824 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
MKS1-206ENST00000577824 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
MKS1-206ENST00000577824 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
MKS1-206ENST00000577824 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
MKS1-206ENST00000577824 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
MKS1-206ENST00000577824 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
MKS1-206ENST00000577824 KRTAP5-8O75690 187 aa3.28□□□□□ -1.88
MKS1-206ENST00000577824 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
MKS1-206ENST00000577824 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
MKS1-206ENST00000577824 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
MKS1-206ENST00000577824 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
MKS1-206ENST00000577824 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
MKS1-206ENST00000577824 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
MKS1-206ENST00000577824 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
MKS1-206ENST00000577824 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
MKS1-206ENST00000577824 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
MKS1-206ENST00000577824 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
MKS1-206ENST00000577824 INE1O15225 51 aa2.62□□□□□ -1.99
MKS1-206ENST00000577824 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
MKS1-206ENST00000577824 PRM1P04553 51 aa2.43□□□□□ -2.02
MKS1-206ENST00000577824 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
MKS1-206ENST00000577824 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
MKS1-206ENST00000577824 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
MKS1-206ENST00000577824 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
MKS1-206ENST00000577824 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 138.8 ms