RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 LINC01558Q9Y6Z2 57 aa4.19□□□□□ -1.74
SNRPN-208ENST00000577565 A0A0D9SG42 100 aa4.17□□□□□ -1.74
SNRPN-208ENST00000577565 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
SNRPN-208ENST00000577565 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
SNRPN-208ENST00000577565 PP632Q6XCG6 107 aa4.14□□□□□ -1.75
SNRPN-208ENST00000577565 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
SNRPN-208ENST00000577565 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
SNRPN-208ENST00000577565 UQCR11O14957 56 aa4.09□□□□□ -1.75
SNRPN-208ENST00000577565 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
SNRPN-208ENST00000577565 MT1LQ93083 61 aa4.09□□□□□ -1.75
SNRPN-208ENST00000577565 V9GYY9 64 aa4.09□□□□□ -1.75
SNRPN-208ENST00000577565 A8MU10 97 aa4.05□□□□□ -1.76
SNRPN-208ENST00000577565 RPS28P62857 69 aaKnown RBP4.04□□□□□ -1.76
SNRPN-208ENST00000577565 Q1T7F1 81 aa4.03□□□□□ -1.76
SNRPN-208ENST00000577565 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
SNRPN-208ENST00000577565 TNP1P09430 55 aa3.94□□□□□ -1.78
SNRPN-208ENST00000577565 K7ERS5 55 aa3.93□□□□□ -1.78
SNRPN-208ENST00000577565 PSPHP1O15172 72 aa3.93□□□□□ -1.78
SNRPN-208ENST00000577565 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
SNRPN-208ENST00000577565 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
SNRPN-208ENST00000577565 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
SNRPN-208ENST00000577565 A6NED7 52 aa3.84□□□□□ -1.79
SNRPN-208ENST00000577565 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
SNRPN-208ENST00000577565 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
SNRPN-208ENST00000577565 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
SNRPN-208ENST00000577565 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
SNRPN-208ENST00000577565 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
SNRPN-208ENST00000577565 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
SNRPN-208ENST00000577565 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
SNRPN-208ENST00000577565 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
SNRPN-208ENST00000577565 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
SNRPN-208ENST00000577565 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
SNRPN-208ENST00000577565 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
SNRPN-208ENST00000577565 CDC42SE1Q9NRR8 79 aa3.72□□□□□ -1.81
SNRPN-208ENST00000577565 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
SNRPN-208ENST00000577565 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
SNRPN-208ENST00000577565 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
SNRPN-208ENST00000577565 ROMO1P60602 79 aa3.64□□□□□ -1.83
SNRPN-208ENST00000577565 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
SNRPN-208ENST00000577565 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
SNRPN-208ENST00000577565 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
SNRPN-208ENST00000577565 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
SNRPN-208ENST00000577565 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
SNRPN-208ENST00000577565 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SNRPN-208ENST00000577565 MT1AP04731 61 aa3.46□□□□□ -1.86
SNRPN-208ENST00000577565 SVIPQ8NHG7 77 aa3.46□□□□□ -1.86
SNRPN-208ENST00000577565 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
SNRPN-208ENST00000577565 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
SNRPN-208ENST00000577565 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
SNRPN-208ENST00000577565 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SNRPN-208ENST00000577565 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
SNRPN-208ENST00000577565 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
SNRPN-208ENST00000577565 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
SNRPN-208ENST00000577565 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
SNRPN-208ENST00000577565 MT3P25713 68 aa3.14□□□□□ -1.91
SNRPN-208ENST00000577565 H3BS24 57 aa3.12□□□□□ -1.91
SNRPN-208ENST00000577565 PRAC1Q96KF2 57 aa3.06□□□□□ -1.92
SNRPN-208ENST00000577565 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
SNRPN-208ENST00000577565 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
SNRPN-208ENST00000577565 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SNRPN-208ENST00000577565 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SNRPN-208ENST00000577565 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
SNRPN-208ENST00000577565 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
SNRPN-208ENST00000577565 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SNRPN-208ENST00000577565 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SNRPN-208ENST00000577565 NDUFAF8A1L188 74 aa2.54□□□□□ -2
SNRPN-208ENST00000577565 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
SNRPN-208ENST00000577565 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
SNRPN-208ENST00000577565 A0A0A0MQY5 61 aa2.39□□□□□ -2.03
SNRPN-208ENST00000577565 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
SNRPN-208ENST00000577565 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
SNRPN-208ENST00000577565 INE1O15225 51 aa2.23□□□□□ -2.05
SNRPN-208ENST00000577565 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
SNRPN-208ENST00000577565 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SNRPN-208ENST00000577565 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SNRPN-208ENST00000577565 PRM1P04553 51 aa1.83□□□□□ -2.12
SNRPN-208ENST00000577565 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms