RNA–Protein interactions for RNA: ENST00000577535.1

TNFAIP1-203, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-203ENST00000577535 UQCR11O14957 56 aa4.37□□□□□ -1.71
TNFAIP1-203ENST00000577535 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
TNFAIP1-203ENST00000577535 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
TNFAIP1-203ENST00000577535 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
TNFAIP1-203ENST00000577535 MT1LQ93083 61 aa4.31□□□□□ -1.72
TNFAIP1-203ENST00000577535 A6NED7 52 aa4.29□□□□□ -1.72
TNFAIP1-203ENST00000577535 MT1MQ8N339 61 aa4.29□□□□□ -1.72
TNFAIP1-203ENST00000577535 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
TNFAIP1-203ENST00000577535 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
TNFAIP1-203ENST00000577535 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
TNFAIP1-203ENST00000577535 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
TNFAIP1-203ENST00000577535 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
TNFAIP1-203ENST00000577535 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
TNFAIP1-203ENST00000577535 K7ERS5 55 aa4.15□□□□□ -1.75
TNFAIP1-203ENST00000577535 MT4P47944 62 aa4.14□□□□□ -1.75
TNFAIP1-203ENST00000577535 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
TNFAIP1-203ENST00000577535 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
TNFAIP1-203ENST00000577535 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
TNFAIP1-203ENST00000577535 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
TNFAIP1-203ENST00000577535 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
TNFAIP1-203ENST00000577535 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
TNFAIP1-203ENST00000577535 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
TNFAIP1-203ENST00000577535 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
TNFAIP1-203ENST00000577535 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
TNFAIP1-203ENST00000577535 ROMO1P60602 79 aa3.95□□□□□ -1.78
TNFAIP1-203ENST00000577535 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
TNFAIP1-203ENST00000577535 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
TNFAIP1-203ENST00000577535 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
TNFAIP1-203ENST00000577535 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
TNFAIP1-203ENST00000577535 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
TNFAIP1-203ENST00000577535 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
TNFAIP1-203ENST00000577535 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
TNFAIP1-203ENST00000577535 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
TNFAIP1-203ENST00000577535 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
TNFAIP1-203ENST00000577535 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
TNFAIP1-203ENST00000577535 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TNFAIP1-203ENST00000577535 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
TNFAIP1-203ENST00000577535 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
TNFAIP1-203ENST00000577535 MT1AP04731 61 aa3.67□□□□□ -1.82
TNFAIP1-203ENST00000577535 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
TNFAIP1-203ENST00000577535 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
TNFAIP1-203ENST00000577535 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
TNFAIP1-203ENST00000577535 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
TNFAIP1-203ENST00000577535 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
TNFAIP1-203ENST00000577535 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
TNFAIP1-203ENST00000577535 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
TNFAIP1-203ENST00000577535 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
TNFAIP1-203ENST00000577535 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
TNFAIP1-203ENST00000577535 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
TNFAIP1-203ENST00000577535 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
TNFAIP1-203ENST00000577535 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
TNFAIP1-203ENST00000577535 MT3P25713 68 aa3.38□□□□□ -1.87
TNFAIP1-203ENST00000577535 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
TNFAIP1-203ENST00000577535 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
TNFAIP1-203ENST00000577535 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
TNFAIP1-203ENST00000577535 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
TNFAIP1-203ENST00000577535 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
TNFAIP1-203ENST00000577535 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
TNFAIP1-203ENST00000577535 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
TNFAIP1-203ENST00000577535 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
TNFAIP1-203ENST00000577535 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
TNFAIP1-203ENST00000577535 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
TNFAIP1-203ENST00000577535 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
TNFAIP1-203ENST00000577535 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
TNFAIP1-203ENST00000577535 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
TNFAIP1-203ENST00000577535 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
TNFAIP1-203ENST00000577535 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
TNFAIP1-203ENST00000577535 H3BS24 57 aa2.58□□□□□ -2
TNFAIP1-203ENST00000577535 LCE1FQ5T754 118 aa2.56□□□□□ -2
TNFAIP1-203ENST00000577535 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
TNFAIP1-203ENST00000577535 A0A0A0MQY5 61 aa2.38□□□□□ -2.03
TNFAIP1-203ENST00000577535 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
TNFAIP1-203ENST00000577535 INE1O15225 51 aa2.27□□□□□ -2.05
TNFAIP1-203ENST00000577535 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
TNFAIP1-203ENST00000577535 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
TNFAIP1-203ENST00000577535 PRM1P04553 51 aa2.04□□□□□ -2.08
TNFAIP1-203ENST00000577535 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
TNFAIP1-203ENST00000577535 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 71.2 ms