RNA–Protein interactions for RNA: ENST00000576532.1

CCNE1-206, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-206ENST00000576532 MACF1Q9UPN3 7388 aaKnown RBP4.16□□□□□ -1.74
CCNE1-206ENST00000576532 TNP1P09430 55 aa4.16□□□□□ -1.74
CCNE1-206ENST00000576532 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
CCNE1-206ENST00000576532 ROMO1P60602 79 aa4.15□□□□□ -1.75
CCNE1-206ENST00000576532 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
CCNE1-206ENST00000576532 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
CCNE1-206ENST00000576532 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
CCNE1-206ENST00000576532 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
CCNE1-206ENST00000576532 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
CCNE1-206ENST00000576532 KMT2DO14686 5537 aa4□□□□□ -1.77
CCNE1-206ENST00000576532 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
CCNE1-206ENST00000576532 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
CCNE1-206ENST00000576532 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
CCNE1-206ENST00000576532 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
CCNE1-206ENST00000576532 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
CCNE1-206ENST00000576532 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
CCNE1-206ENST00000576532 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
CCNE1-206ENST00000576532 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
CCNE1-206ENST00000576532 MT3P25713 68 aa3.87□□□□□ -1.79
CCNE1-206ENST00000576532 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
CCNE1-206ENST00000576532 MT1EP04732 61 aa3.84□□□□□ -1.79
CCNE1-206ENST00000576532 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
CCNE1-206ENST00000576532 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
CCNE1-206ENST00000576532 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
CCNE1-206ENST00000576532 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
CCNE1-206ENST00000576532 NEBP20929 6669 aa3.8□□□□□ -1.8
CCNE1-206ENST00000576532 SPRR2EP22531 72 aa3.76□□□□□ -1.81
CCNE1-206ENST00000576532 SPRR2BP35325 72 aa3.76□□□□□ -1.81
CCNE1-206ENST00000576532 SPRR2AP35326 72 aa3.76□□□□□ -1.81
CCNE1-206ENST00000576532 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CCNE1-206ENST00000576532 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
CCNE1-206ENST00000576532 MT1LQ93083 61 aa3.73□□□□□ -1.81
CCNE1-206ENST00000576532 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
CCNE1-206ENST00000576532 MT1GP13640 62 aa3.71□□□□□ -1.82
CCNE1-206ENST00000576532 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
CCNE1-206ENST00000576532 SPRR2DP22532 72 aa3.63□□□□□ -1.83
CCNE1-206ENST00000576532 MT1MQ8N339 61 aa3.63□□□□□ -1.83
CCNE1-206ENST00000576532 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
CCNE1-206ENST00000576532 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CCNE1-206ENST00000576532 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
CCNE1-206ENST00000576532 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CCNE1-206ENST00000576532 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
CCNE1-206ENST00000576532 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
CCNE1-206ENST00000576532 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
CCNE1-206ENST00000576532 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
CCNE1-206ENST00000576532 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CCNE1-206ENST00000576532 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
CCNE1-206ENST00000576532 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
CCNE1-206ENST00000576532 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
CCNE1-206ENST00000576532 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
CCNE1-206ENST00000576532 MT1AP04731 61 aa3.18□□□□□ -1.9
CCNE1-206ENST00000576532 MT4P47944 62 aa3.15□□□□□ -1.91
CCNE1-206ENST00000576532 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
CCNE1-206ENST00000576532 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
CCNE1-206ENST00000576532 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
CCNE1-206ENST00000576532 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
CCNE1-206ENST00000576532 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
CCNE1-206ENST00000576532 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
CCNE1-206ENST00000576532 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
CCNE1-206ENST00000576532 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
CCNE1-206ENST00000576532 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CCNE1-206ENST00000576532 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
CCNE1-206ENST00000576532 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CCNE1-206ENST00000576532 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
CCNE1-206ENST00000576532 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
CCNE1-206ENST00000576532 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
CCNE1-206ENST00000576532 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
CCNE1-206ENST00000576532 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
CCNE1-206ENST00000576532 INE1O15225 51 aa2.45□□□□□ -2.02
CCNE1-206ENST00000576532 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
CCNE1-206ENST00000576532 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
CCNE1-206ENST00000576532 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CCNE1-206ENST00000576532 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CCNE1-206ENST00000576532 PRM1P04553 51 aa2.13□□□□□ -2.07
CCNE1-206ENST00000576532 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
CCNE1-206ENST00000576532 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CCNE1-206ENST00000576532 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
CCNE1-206ENST00000576532 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms