RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 KRTAP12-1P59990 96 aa5.2□□□□□ -1.58
CTDNEP1-211ENST00000575783 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
CTDNEP1-211ENST00000575783 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
CTDNEP1-211ENST00000575783 TNP1P09430 55 aa5.15□□□□□ -1.59
CTDNEP1-211ENST00000575783 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
CTDNEP1-211ENST00000575783 SEC61GP60059 68 aa5.08□□□□□ -1.6
CTDNEP1-211ENST00000575783 SERP1Q9Y6X1 66 aa5.08□□□□□ -1.6
CTDNEP1-211ENST00000575783 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CTDNEP1-211ENST00000575783 KRTAP5-2Q701N4 177 aa5.05□□□□□ -1.6
CTDNEP1-211ENST00000575783 A0A1B0GU33 70 aa5.04□□□□□ -1.6
CTDNEP1-211ENST00000575783 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
CTDNEP1-211ENST00000575783 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
CTDNEP1-211ENST00000575783 SNURFQ9Y675 71 aa4.97□□□□□ -1.61
CTDNEP1-211ENST00000575783 SPANXA2-OT1Q8N9U9 137 aa4.92□□□□□ -1.62
CTDNEP1-211ENST00000575783 A8MU10 97 aa4.9□□□□□ -1.63
CTDNEP1-211ENST00000575783 SMIM26A0A096LP01 95 aa4.89□□□□□ -1.63
CTDNEP1-211ENST00000575783 COA5Q86WW8 74 aa4.88□□□□□ -1.63
CTDNEP1-211ENST00000575783 SERP2Q8N6R1 65 aa4.88□□□□□ -1.63
CTDNEP1-211ENST00000575783 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
CTDNEP1-211ENST00000575783 MT1AP04731 61 aa4.82□□□□□ -1.64
CTDNEP1-211ENST00000575783 COX7CP15954 63 aa4.8□□□□□ -1.64
CTDNEP1-211ENST00000575783 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
CTDNEP1-211ENST00000575783 ANAPC13Q9BS18 74 aa4.77□□□□□ -1.65
CTDNEP1-211ENST00000575783 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
CTDNEP1-211ENST00000575783 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
CTDNEP1-211ENST00000575783 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
CTDNEP1-211ENST00000575783 A0A1B0GU69 56 aa4.66□□□□□ -1.66
CTDNEP1-211ENST00000575783 H7BZZ5 65 aa4.66□□□□□ -1.66
CTDNEP1-211ENST00000575783 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
CTDNEP1-211ENST00000575783 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
CTDNEP1-211ENST00000575783 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
CTDNEP1-211ENST00000575783 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CTDNEP1-211ENST00000575783 ATP5EP56381 51 aaPredicted RBP4.55□□□□□ -1.68
CTDNEP1-211ENST00000575783 TMEM258P61165 79 aa4.52□□□□□ -1.69
CTDNEP1-211ENST00000575783 MT3P25713 68 aa4.46□□□□□ -1.7
CTDNEP1-211ENST00000575783 PCP4P48539 62 aa4.45□□□□□ -1.7
CTDNEP1-211ENST00000575783 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
CTDNEP1-211ENST00000575783 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
CTDNEP1-211ENST00000575783 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
CTDNEP1-211ENST00000575783 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
CTDNEP1-211ENST00000575783 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
CTDNEP1-211ENST00000575783 V9GYY9 64 aa4.25□□□□□ -1.73
CTDNEP1-211ENST00000575783 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
CTDNEP1-211ENST00000575783 Q1T7F1 81 aa4.21□□□□□ -1.74
CTDNEP1-211ENST00000575783 UQCR11O14957 56 aa4.16□□□□□ -1.74
CTDNEP1-211ENST00000575783 PSPHP1O15172 72 aa4.12□□□□□ -1.75
CTDNEP1-211ENST00000575783 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
CTDNEP1-211ENST00000575783 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
CTDNEP1-211ENST00000575783 K7ERS5 55 aa4.06□□□□□ -1.76
CTDNEP1-211ENST00000575783 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
CTDNEP1-211ENST00000575783 SVIPQ8NHG7 77 aa4.04□□□□□ -1.76
CTDNEP1-211ENST00000575783 A6NED7 52 aa4.02□□□□□ -1.77
CTDNEP1-211ENST00000575783 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
CTDNEP1-211ENST00000575783 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
CTDNEP1-211ENST00000575783 CDC42SE1Q9NRR8 79 aa3.91□□□□□ -1.78
CTDNEP1-211ENST00000575783 H3BS24 57 aa3.89□□□□□ -1.79
CTDNEP1-211ENST00000575783 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
CTDNEP1-211ENST00000575783 ROMO1P60602 79 aa3.73□□□□□ -1.81
CTDNEP1-211ENST00000575783 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
CTDNEP1-211ENST00000575783 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
CTDNEP1-211ENST00000575783 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
CTDNEP1-211ENST00000575783 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
CTDNEP1-211ENST00000575783 PRO0628Q9UI54 55 aa3.54□□□□□ -1.84
CTDNEP1-211ENST00000575783 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
CTDNEP1-211ENST00000575783 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
CTDNEP1-211ENST00000575783 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
CTDNEP1-211ENST00000575783 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
CTDNEP1-211ENST00000575783 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
CTDNEP1-211ENST00000575783 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
CTDNEP1-211ENST00000575783 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
CTDNEP1-211ENST00000575783 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
CTDNEP1-211ENST00000575783 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
CTDNEP1-211ENST00000575783 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
CTDNEP1-211ENST00000575783 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
CTDNEP1-211ENST00000575783 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
CTDNEP1-211ENST00000575783 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
CTDNEP1-211ENST00000575783 INE1O15225 51 aa2.11□□□□□ -2.07
CTDNEP1-211ENST00000575783 PRM1P04553 51 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms