RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-223ENST00000575701 PP632Q6XCG6 107 aa9.09□□□□□ -0.95
SRRM2-223ENST00000575701 DSTQ03001 7570 aaKnown RBP9.02□□□□□ -0.97
SRRM2-223ENST00000575701 MT1LQ93083 61 aa9.02□□□□□ -0.97
SRRM2-223ENST00000575701 PCP4P48539 62 aa9□□□□□ -0.97
SRRM2-223ENST00000575701 KRTAP25-1Q3LHN0 102 aa8.99□□□□□ -0.97
SRRM2-223ENST00000575701 RPS28P62857 69 aaKnown RBP8.98□□□□□ -0.97
SRRM2-223ENST00000575701 A6NED7 52 aa8.95□□□□□ -0.98
SRRM2-223ENST00000575701 MT1MQ8N339 61 aa8.94□□□□□ -0.98
SRRM2-223ENST00000575701 KRTAP12-3P60328 96 aa8.89□□□□□ -0.99
SRRM2-223ENST00000575701 KRTAP23-1A1A580 65 aa8.69□□□□□ -1.02
SRRM2-223ENST00000575701 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
SRRM2-223ENST00000575701 KRTAP4-3Q9BYR4 195 aa8.65□□□□□ -1.02
SRRM2-223ENST00000575701 KRTAP4-9Q9BYQ8 210 aa8.56□□□□□ -1.04
SRRM2-223ENST00000575701 LCE4AQ5TA78 99 aa8.55□□□□□ -1.04
SRRM2-223ENST00000575701 ROMO1P60602 79 aa8.52□□□□□ -1.05
SRRM2-223ENST00000575701 KRTAP4-7Q9BYR0 210 aa8.52□□□□□ -1.05
SRRM2-223ENST00000575701 KRTAP19-4Q3LI73 84 aa8.51□□□□□ -1.05
SRRM2-223ENST00000575701 LCE1DQ5T752 114 aa8.44□□□□□ -1.06
SRRM2-223ENST00000575701 KRTAP5-4Q6L8H1 288 aa8.41□□□□□ -1.06
SRRM2-223ENST00000575701 KRTAP15-1Q3LI76 137 aa8.38□□□□□ -1.07
SRRM2-223ENST00000575701 MT4P47944 62 aa8.35□□□□□ -1.07
SRRM2-223ENST00000575701 HMCN1Q96RW7 5635 aa8.26□□□□□ -1.09
SRRM2-223ENST00000575701 LCE3CQ5T5A8 94 aa8.2□□□□□ -1.1
SRRM2-223ENST00000575701 KRTAP5-5Q701N2 237 aaPredicted RBP8.18□□□□□ -1.1
SRRM2-223ENST00000575701 GPR98Q8WXG9 6306 aa8.13□□□□□ -1.11
SRRM2-223ENST00000575701 KRTAP4-6Q9BYQ5 205 aa8.13□□□□□ -1.11
SRRM2-223ENST00000575701 LOC100996750A0A140TA64 210 aa8.07□□□□□ -1.12
SRRM2-223ENST00000575701 KRTAP12-4P60329 112 aa7.95□□□□□ -1.14
SRRM2-223ENST00000575701 SPRR5A0A1B0GTR4 108 aa7.94□□□□□ -1.14
SRRM2-223ENST00000575701 KRTAP20-2Q3LI61 65 aa7.91□□□□□ -1.14
SRRM2-223ENST00000575701 BRK1Q8WUW1 75 aa7.89□□□□□ -1.15
SRRM2-223ENST00000575701 AHNAK2Q8IVF2 5795 aa7.86□□□□□ -1.15
SRRM2-223ENST00000575701 SYNE1Q8NF91 8797 aaKnown RBP7.82□□□□□ -1.16
SRRM2-223ENST00000575701 KRTAP5-10Q6L8G5 202 aa7.72□□□□□ -1.17
SRRM2-223ENST00000575701 MT1AP04731 61 aa7.71□□□□□ -1.18
SRRM2-223ENST00000575701 KRTAP9-6A8MVA2 160 aa7.67□□□□□ -1.18
SRRM2-223ENST00000575701 KRTAP5-3Q6L8H2 238 aa7.66□□□□□ -1.18
SRRM2-223ENST00000575701 KRTAP6-1Q3LI64 71 aa7.6□□□□□ -1.19
SRRM2-223ENST00000575701 PMAIP1Q13794 54 aa7.43□□□□□ -1.22
SRRM2-223ENST00000575701 KRTAP5-7Q6L8G8 165 aa7.42□□□□□ -1.22
SRRM2-223ENST00000575701 KRTAP5-2Q701N4 177 aa7.41□□□□□ -1.22
SRRM2-223ENST00000575701 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
SRRM2-223ENST00000575701 KRTAP6-2Q3LI66 62 aa7.23□□□□□ -1.25
SRRM2-223ENST00000575701 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
SRRM2-223ENST00000575701 MT3P25713 68 aa7.05□□□□□ -1.28
SRRM2-223ENST00000575701 PRAC1Q96KF2 57 aa7.05□□□□□ -1.28
SRRM2-223ENST00000575701 PRO0628Q9UI54 55 aa7.04□□□□□ -1.28
SRRM2-223ENST00000575701 KRTAP5-8O75690 187 aa6.92□□□□□ -1.3
SRRM2-223ENST00000575701 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
SRRM2-223ENST00000575701 KTN1-AS1Q86SY8 53 aa6.71□□□□□ -1.34
SRRM2-223ENST00000575701 KRTAP5-1Q6L8H4 278 aa6.58□□□□□ -1.36
SRRM2-223ENST00000575701 KRTAP9-9Q9BYP9 154 aa6.54□□□□□ -1.36
SRRM2-223ENST00000575701 LCE1EQ5T753 118 aa6.44□□□□□ -1.38
SRRM2-223ENST00000575701 MUC5BQ9HC84 5762 aaPredicted RBP6.43□□□□□ -1.38
SRRM2-223ENST00000575701 MUC5ACP98088 5654 aa6.42□□□□□ -1.38
SRRM2-223ENST00000575701 SVIPQ8NHG7 77 aa6.4□□□□□ -1.38
SRRM2-223ENST00000575701 AHNAKQ09666 5890 aaKnown RBP6.38□□□□□ -1.39
SRRM2-223ENST00000575701 LUZP6Q538Z0 58 aa6.04□□□□□ -1.44
SRRM2-223ENST00000575701 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
SRRM2-223ENST00000575701 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
SRRM2-223ENST00000575701 LCE1CQ5T751 118 aa5.97□□□□□ -1.45
SRRM2-223ENST00000575701 LCE3DQ9BYE3 92 aa5.97□□□□□ -1.45
SRRM2-223ENST00000575701 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.5
SRRM2-223ENST00000575701 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
SRRM2-223ENST00000575701 KRTAP5-11Q6L8G4 156 aa5.39□□□□□ -1.55
SRRM2-223ENST00000575701 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
SRRM2-223ENST00000575701 LCE1FQ5T754 118 aa5.22□□□□□ -1.57
SRRM2-223ENST00000575701 KRTAP21-2Q3LI59 83 aa5.02□□□□□ -1.61
SRRM2-223ENST00000575701 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
SRRM2-223ENST00000575701 PHGR1C9JFL3 82 aa4.63□□□□□ -1.67
SRRM2-223ENST00000575701 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
SRRM2-223ENST00000575701 PRM1P04553 51 aa4.34□□□□□ -1.71
SRRM2-223ENST00000575701 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
SRRM2-223ENST00000575701 INE1O15225 51 aa4.05□□□□□ -1.76
SRRM2-223ENST00000575701 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
SRRM2-223ENST00000575701 H3BS24 57 aa3.6□□□□□ -1.83
SRRM2-223ENST00000575701 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
SRRM2-223ENST00000575701 MUC16Q8WXI7 14507 aa3.01□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 28.5 ms