RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 KRTAP5-9P26371 169 aa6□□□□□ -1.45
SMPD3-212ENST00000574662 NEBP20929 6669 aa5.92□□□□□ -1.46
SMPD3-212ENST00000574662 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
SMPD3-212ENST00000574662 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
SMPD3-212ENST00000574662 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
SMPD3-212ENST00000574662 MDN1Q9NU22 5596 aa5.83□□□□□ -1.48
SMPD3-212ENST00000574662 MT1EP04732 61 aa5.8□□□□□ -1.48
SMPD3-212ENST00000574662 KRTAP20-1Q3LI63 56 aa5.8□□□□□ -1.48
SMPD3-212ENST00000574662 SPRR2EP22531 72 aa5.78□□□□□ -1.48
SMPD3-212ENST00000574662 SPRR2BP35325 72 aa5.78□□□□□ -1.48
SMPD3-212ENST00000574662 SPRR2AP35326 72 aa5.78□□□□□ -1.48
SMPD3-212ENST00000574662 INE1O15225 51 aa5.75□□□□□ -1.49
SMPD3-212ENST00000574662 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
SMPD3-212ENST00000574662 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
SMPD3-212ENST00000574662 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
SMPD3-212ENST00000574662 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
SMPD3-212ENST00000574662 MT1LQ93083 61 aa5.65□□□□□ -1.51
SMPD3-212ENST00000574662 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
SMPD3-212ENST00000574662 SPRR2DP22532 72 aa5.59□□□□□ -1.51
SMPD3-212ENST00000574662 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
SMPD3-212ENST00000574662 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
SMPD3-212ENST00000574662 MT1GP13640 62 aa5.54□□□□□ -1.52
SMPD3-212ENST00000574662 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
SMPD3-212ENST00000574662 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
SMPD3-212ENST00000574662 MT1MQ8N339 61 aa5.48□□□□□ -1.53
SMPD3-212ENST00000574662 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
SMPD3-212ENST00000574662 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
SMPD3-212ENST00000574662 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
SMPD3-212ENST00000574662 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
SMPD3-212ENST00000574662 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
SMPD3-212ENST00000574662 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
SMPD3-212ENST00000574662 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
SMPD3-212ENST00000574662 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
SMPD3-212ENST00000574662 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
SMPD3-212ENST00000574662 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
SMPD3-212ENST00000574662 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
SMPD3-212ENST00000574662 MT4P47944 62 aa4.88□□□□□ -1.63
SMPD3-212ENST00000574662 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
SMPD3-212ENST00000574662 MT1AP04731 61 aa4.78□□□□□ -1.64
SMPD3-212ENST00000574662 KRTAP6-1Q3LI64 71 aa4.77□□□□□ -1.65
SMPD3-212ENST00000574662 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SMPD3-212ENST00000574662 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
SMPD3-212ENST00000574662 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
SMPD3-212ENST00000574662 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
SMPD3-212ENST00000574662 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
SMPD3-212ENST00000574662 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.68
SMPD3-212ENST00000574662 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
SMPD3-212ENST00000574662 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
SMPD3-212ENST00000574662 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SMPD3-212ENST00000574662 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
SMPD3-212ENST00000574662 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
SMPD3-212ENST00000574662 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SMPD3-212ENST00000574662 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
SMPD3-212ENST00000574662 MT3P25713 68 aa4.35□□□□□ -1.71
SMPD3-212ENST00000574662 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
SMPD3-212ENST00000574662 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.74
SMPD3-212ENST00000574662 PRM1P04553 51 aa4.12□□□□□ -1.75
SMPD3-212ENST00000574662 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.76
SMPD3-212ENST00000574662 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SMPD3-212ENST00000574662 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
SMPD3-212ENST00000574662 LCE1EQ5T753 118 aa3.84□□□□□ -1.8
SMPD3-212ENST00000574662 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
SMPD3-212ENST00000574662 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
SMPD3-212ENST00000574662 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SMPD3-212ENST00000574662 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
SMPD3-212ENST00000574662 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
SMPD3-212ENST00000574662 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
SMPD3-212ENST00000574662 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
SMPD3-212ENST00000574662 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SMPD3-212ENST00000574662 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SMPD3-212ENST00000574662 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SMPD3-212ENST00000574662 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
SMPD3-212ENST00000574662 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
SMPD3-212ENST00000574662 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SMPD3-212ENST00000574662 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SMPD3-212ENST00000574662 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
SMPD3-212ENST00000574662 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
SMPD3-212ENST00000574662 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 67.5 ms