RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 LRP2P98164 4655 aa1.39□□□□□ -2.19
TOM1L1-216ENST00000573607 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
TOM1L1-216ENST00000573607 APOBP04114 4563 aaKnown RBP1.38□□□□□ -2.19
TOM1L1-216ENST00000573607 H0YAA0 97 aa1.38□□□□□ -2.19
TOM1L1-216ENST00000573607 H1FX-AS1Q4G0G2 97 aa1.38□□□□□ -2.19
TOM1L1-216ENST00000573607 VPS13BQ7Z7G8 4022 aa1.37□□□□□ -2.19
TOM1L1-216ENST00000573607 C9orf92A6NGG3 77 aa1.37□□□□□ -2.19
TOM1L1-216ENST00000573607 SMR3BP02814 79 aaPredicted RBP1.36□□□□□ -2.19
TOM1L1-216ENST00000573607 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
TOM1L1-216ENST00000573607 TNXBP22105 4242 aa1.35□□□□□ -2.19
TOM1L1-216ENST00000573607 CSAG1Q6PB30 78 aa1.34□□□□□ -2.19
TOM1L1-216ENST00000573607 Q5VSD8 79 aa1.33□□□□□ -2.2
TOM1L1-216ENST00000573607 S4R3F8 94 aa1.33□□□□□ -2.2
TOM1L1-216ENST00000573607 FAT1Q14517 4588 aa1.33□□□□□ -2.2
TOM1L1-216ENST00000573607 FAT3Q8TDW7 4589 aa1.33□□□□□ -2.2
TOM1L1-216ENST00000573607 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
TOM1L1-216ENST00000573607 MT1HL1P0DM35 61 aa1.31□□□□□ -2.2
TOM1L1-216ENST00000573607 LRP1Q07954 4544 aaKnown RBP1.3□□□□□ -2.2
TOM1L1-216ENST00000573607 M0QZ58 72 aa1.29□□□□□ -2.2
TOM1L1-216ENST00000573607 A0A0D9SG42 100 aa1.25□□□□□ -2.21
TOM1L1-216ENST00000573607 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
TOM1L1-216ENST00000573607 GPR98Q8WXG9 6306 aa1.23□□□□□ -2.21
TOM1L1-216ENST00000573607 NEBP20929 6669 aa1.23□□□□□ -2.21
TOM1L1-216ENST00000573607 KRTAP19-2Q3LHN2 52 aa1.22□□□□□ -2.21
TOM1L1-216ENST00000573607 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
TOM1L1-216ENST00000573607 MUC17Q685J3 4493 aa1.21□□□□□ -2.22
TOM1L1-216ENST00000573607 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
TOM1L1-216ENST00000573607 USH2AO75445 5202 aa1.18□□□□□ -2.22
TOM1L1-216ENST00000573607 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
TOM1L1-216ENST00000573607 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
TOM1L1-216ENST00000573607 PLAC4Q8WY50 150 aa1.15□□□□□ -2.23
TOM1L1-216ENST00000573607 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
TOM1L1-216ENST00000573607 LPAP08519 4548 aa1.15□□□□□ -2.23
TOM1L1-216ENST00000573607 FLGP20930 4061 aaPredicted RBP1.15□□□□□ -2.23
TOM1L1-216ENST00000573607 TNP1P09430 55 aa1.14□□□□□ -2.23
TOM1L1-216ENST00000573607 SPRR2GQ9BYE4 73 aa1.14□□□□□ -2.23
TOM1L1-216ENST00000573607 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
TOM1L1-216ENST00000573607 KMT2DO14686 5537 aa1.11□□□□□ -2.23
TOM1L1-216ENST00000573607 KRTAP19-8Q3LI54 63 aa1.1□□□□□ -2.23
TOM1L1-216ENST00000573607 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
TOM1L1-216ENST00000573607 MT1HP80294 61 aa1.09□□□□□ -2.23
TOM1L1-216ENST00000573607 MDN1Q9NU22 5596 aa1.07□□□□□ -2.24
TOM1L1-216ENST00000573607 MT2AP02795 61 aa1.07□□□□□ -2.24
TOM1L1-216ENST00000573607 MT1FP04733 61 aa1.07□□□□□ -2.24
TOM1L1-216ENST00000573607 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
TOM1L1-216ENST00000573607 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
TOM1L1-216ENST00000573607 M0R2T5 61 aa1.05□□□□□ -2.24
TOM1L1-216ENST00000573607 MT1BP07438 61 aa1.05□□□□□ -2.24
TOM1L1-216ENST00000573607 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
TOM1L1-216ENST00000573607 KRTAP2-3P0C7H8 128 aa1.04□□□□□ -2.24
TOM1L1-216ENST00000573607 MT1XP80297 61 aa1.04□□□□□ -2.24
TOM1L1-216ENST00000573607 KRTAP2-4Q9BYR9 128 aa1.04□□□□□ -2.24
TOM1L1-216ENST00000573607 KRTAP2-1Q9BYU5 128 aa0.99□□□□□ -2.25
TOM1L1-216ENST00000573607 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
TOM1L1-216ENST00000573607 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
TOM1L1-216ENST00000573607 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
TOM1L1-216ENST00000573607 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
TOM1L1-216ENST00000573607 KRTAP19-7Q3SYF9 63 aa0.93□□□□□ -2.26
TOM1L1-216ENST00000573607 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
TOM1L1-216ENST00000573607 MT1LQ93083 61 aa0.91□□□□□ -2.26
TOM1L1-216ENST00000573607 MT1EP04732 61 aa0.9□□□□□ -2.27
TOM1L1-216ENST00000573607 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
TOM1L1-216ENST00000573607 MT1GP13640 62 aa0.86□□□□□ -2.27
TOM1L1-216ENST00000573607 MT1MQ8N339 61 aa0.84□□□□□ -2.27
TOM1L1-216ENST00000573607 SPRR2EP22531 72 aa0.83□□□□□ -2.28
TOM1L1-216ENST00000573607 SPRR2BP35325 72 aa0.83□□□□□ -2.28
TOM1L1-216ENST00000573607 SPRR2AP35326 72 aa0.83□□□□□ -2.28
TOM1L1-216ENST00000573607 SPRR2DP22532 72 aa0.81□□□□□ -2.28
TOM1L1-216ENST00000573607 MT1AP04731 61 aa0.8□□□□□ -2.28
TOM1L1-216ENST00000573607 SPRR2FQ96RM1 72 aa0.77□□□□□ -2.29
TOM1L1-216ENST00000573607 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
TOM1L1-216ENST00000573607 KRTAP6-1Q3LI64 71 aa0.75□□□□□ -2.29
TOM1L1-216ENST00000573607 MT4P47944 62 aa0.71□□□□□ -2.3
TOM1L1-216ENST00000573607 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
TOM1L1-216ENST00000573607 PRM1P04553 51 aa0.68□□□□□ -2.3
TOM1L1-216ENST00000573607 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
TOM1L1-216ENST00000573607 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
TOM1L1-216ENST00000573607 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 40.2 ms