RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
TVP23A-207ENST00000573360 MT1EP04732 61 aa4.94□□□□□ -1.62
TVP23A-207ENST00000573360 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
TVP23A-207ENST00000573360 MDN1Q9NU22 5596 aa4.94□□□□□ -1.62
TVP23A-207ENST00000573360 INE1O15225 51 aa4.93□□□□□ -1.62
TVP23A-207ENST00000573360 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
TVP23A-207ENST00000573360 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
TVP23A-207ENST00000573360 MT1LQ93083 61 aa4.87□□□□□ -1.63
TVP23A-207ENST00000573360 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
TVP23A-207ENST00000573360 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
TVP23A-207ENST00000573360 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
TVP23A-207ENST00000573360 SPRR2EP22531 72 aa4.74□□□□□ -1.65
TVP23A-207ENST00000573360 SPRR2BP35325 72 aa4.74□□□□□ -1.65
TVP23A-207ENST00000573360 SPRR2AP35326 72 aa4.74□□□□□ -1.65
TVP23A-207ENST00000573360 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
TVP23A-207ENST00000573360 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
TVP23A-207ENST00000573360 MT1GP13640 62 aa4.71□□□□□ -1.66
TVP23A-207ENST00000573360 MT1MQ8N339 61 aa4.68□□□□□ -1.66
TVP23A-207ENST00000573360 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
TVP23A-207ENST00000573360 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
TVP23A-207ENST00000573360 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
TVP23A-207ENST00000573360 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
TVP23A-207ENST00000573360 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
TVP23A-207ENST00000573360 SPRR2DP22532 72 aa4.53□□□□□ -1.68
TVP23A-207ENST00000573360 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
TVP23A-207ENST00000573360 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
TVP23A-207ENST00000573360 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
TVP23A-207ENST00000573360 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
TVP23A-207ENST00000573360 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
TVP23A-207ENST00000573360 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
TVP23A-207ENST00000573360 NEBP20929 6669 aa4.28□□□□□ -1.73
TVP23A-207ENST00000573360 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
TVP23A-207ENST00000573360 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
TVP23A-207ENST00000573360 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
TVP23A-207ENST00000573360 MT4P47944 62 aa4.13□□□□□ -1.75
TVP23A-207ENST00000573360 MT1AP04731 61 aa4.06□□□□□ -1.76
TVP23A-207ENST00000573360 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
TVP23A-207ENST00000573360 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
TVP23A-207ENST00000573360 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
TVP23A-207ENST00000573360 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
TVP23A-207ENST00000573360 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
TVP23A-207ENST00000573360 KRTAP6-2Q3LI66 62 aa3.91□□□□□ -1.78
TVP23A-207ENST00000573360 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
TVP23A-207ENST00000573360 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
TVP23A-207ENST00000573360 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
TVP23A-207ENST00000573360 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
TVP23A-207ENST00000573360 PRM1P04553 51 aa3.75□□□□□ -1.81
TVP23A-207ENST00000573360 MT3P25713 68 aa3.75□□□□□ -1.81
TVP23A-207ENST00000573360 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
TVP23A-207ENST00000573360 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
TVP23A-207ENST00000573360 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
TVP23A-207ENST00000573360 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
TVP23A-207ENST00000573360 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
TVP23A-207ENST00000573360 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
TVP23A-207ENST00000573360 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
TVP23A-207ENST00000573360 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
TVP23A-207ENST00000573360 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
TVP23A-207ENST00000573360 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
TVP23A-207ENST00000573360 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
TVP23A-207ENST00000573360 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
TVP23A-207ENST00000573360 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
TVP23A-207ENST00000573360 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
TVP23A-207ENST00000573360 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
TVP23A-207ENST00000573360 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
TVP23A-207ENST00000573360 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
TVP23A-207ENST00000573360 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
TVP23A-207ENST00000573360 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
TVP23A-207ENST00000573360 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
TVP23A-207ENST00000573360 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
TVP23A-207ENST00000573360 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
TVP23A-207ENST00000573360 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
TVP23A-207ENST00000573360 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
TVP23A-207ENST00000573360 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
TVP23A-207ENST00000573360 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
TVP23A-207ENST00000573360 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
TVP23A-207ENST00000573360 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
TVP23A-207ENST00000573360 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
TVP23A-207ENST00000573360 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 46.3 ms