RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 UQCR11O14957 56 aa6.12□□□□□ -1.43
SMG6-212ENST00000573153 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
SMG6-212ENST00000573153 KRTAP4-3Q9BYR4 195 aa6.06□□□□□ -1.44
SMG6-212ENST00000573153 HMCN1Q96RW7 5635 aa6.04□□□□□ -1.44
SMG6-212ENST00000573153 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
SMG6-212ENST00000573153 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
SMG6-212ENST00000573153 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.46
SMG6-212ENST00000573153 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
SMG6-212ENST00000573153 MT4P47944 62 aa5.91□□□□□ -1.46
SMG6-212ENST00000573153 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
SMG6-212ENST00000573153 V9GYY9 64 aa5.91□□□□□ -1.46
SMG6-212ENST00000573153 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
SMG6-212ENST00000573153 Q1T7F1 81 aa5.89□□□□□ -1.47
SMG6-212ENST00000573153 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
SMG6-212ENST00000573153 K7ERS5 55 aa5.84□□□□□ -1.47
SMG6-212ENST00000573153 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
SMG6-212ENST00000573153 PSPHP1O15172 72 aa5.82□□□□□ -1.48
SMG6-212ENST00000573153 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
SMG6-212ENST00000573153 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
SMG6-212ENST00000573153 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
SMG6-212ENST00000573153 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
SMG6-212ENST00000573153 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
SMG6-212ENST00000573153 A6NED7 52 aa5.63□□□□□ -1.51
SMG6-212ENST00000573153 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
SMG6-212ENST00000573153 SYNE1Q8NF91 8797 aaKnown RBP5.6□□□□□ -1.51
SMG6-212ENST00000573153 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
SMG6-212ENST00000573153 RPS28P62857 69 aaKnown RBP5.59□□□□□ -1.51
SMG6-212ENST00000573153 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
SMG6-212ENST00000573153 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SMG6-212ENST00000573153 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
SMG6-212ENST00000573153 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
SMG6-212ENST00000573153 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
SMG6-212ENST00000573153 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
SMG6-212ENST00000573153 ROMO1P60602 79 aa5.46□□□□□ -1.54
SMG6-212ENST00000573153 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
SMG6-212ENST00000573153 PCP4P48539 62 aa5.41□□□□□ -1.54
SMG6-212ENST00000573153 MT1AP04731 61 aa5.25□□□□□ -1.57
SMG6-212ENST00000573153 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
SMG6-212ENST00000573153 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
SMG6-212ENST00000573153 KRTAP9-6A8MVA2 160 aa5.24□□□□□ -1.57
SMG6-212ENST00000573153 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
SMG6-212ENST00000573153 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
SMG6-212ENST00000573153 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
SMG6-212ENST00000573153 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
SMG6-212ENST00000573153 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
SMG6-212ENST00000573153 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.64
SMG6-212ENST00000573153 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
SMG6-212ENST00000573153 BRK1Q8WUW1 75 aa4.8□□□□□ -1.64
SMG6-212ENST00000573153 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
SMG6-212ENST00000573153 MT3P25713 68 aa4.78□□□□□ -1.64
SMG6-212ENST00000573153 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
SMG6-212ENST00000573153 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
SMG6-212ENST00000573153 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
SMG6-212ENST00000573153 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
SMG6-212ENST00000573153 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
SMG6-212ENST00000573153 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
SMG6-212ENST00000573153 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
SMG6-212ENST00000573153 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
SMG6-212ENST00000573153 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
SMG6-212ENST00000573153 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
SMG6-212ENST00000573153 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
SMG6-212ENST00000573153 H3BS24 57 aa3.88□□□□□ -1.79
SMG6-212ENST00000573153 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
SMG6-212ENST00000573153 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
SMG6-212ENST00000573153 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
SMG6-212ENST00000573153 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
SMG6-212ENST00000573153 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
SMG6-212ENST00000573153 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
SMG6-212ENST00000573153 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
SMG6-212ENST00000573153 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
SMG6-212ENST00000573153 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
SMG6-212ENST00000573153 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SMG6-212ENST00000573153 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
SMG6-212ENST00000573153 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
SMG6-212ENST00000573153 PRM1P04553 51 aa2.77□□□□□ -1.97
SMG6-212ENST00000573153 INE1O15225 51 aa2.75□□□□□ -1.97
SMG6-212ENST00000573153 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
SMG6-212ENST00000573153 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 36.3 ms