RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
NPLOC4-210ENST00000572824 SPANXA2-OT1Q8N9U9 137 aa3.72□□□□□ -1.81
NPLOC4-210ENST00000572824 LINC01554Q52M75 96 aa3.71□□□□□ -1.82
NPLOC4-210ENST00000572824 R4GN34 69 aa3.71□□□□□ -1.82
NPLOC4-210ENST00000572824 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
NPLOC4-210ENST00000572824 H3BPC8 53 aa3.68□□□□□ -1.82
NPLOC4-210ENST00000572824 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
NPLOC4-210ENST00000572824 PSPHP1O15172 72 aa3.67□□□□□ -1.82
NPLOC4-210ENST00000572824 DMAC1Q96GE9 116 aa3.65□□□□□ -1.83
NPLOC4-210ENST00000572824 MP68P56378 58 aa3.63□□□□□ -1.83
NPLOC4-210ENST00000572824 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
NPLOC4-210ENST00000572824 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
NPLOC4-210ENST00000572824 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
NPLOC4-210ENST00000572824 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
NPLOC4-210ENST00000572824 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
NPLOC4-210ENST00000572824 A6NED7 52 aa3.56□□□□□ -1.84
NPLOC4-210ENST00000572824 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
NPLOC4-210ENST00000572824 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
NPLOC4-210ENST00000572824 COA5Q86WW8 74 aa3.54□□□□□ -1.84
NPLOC4-210ENST00000572824 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
NPLOC4-210ENST00000572824 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
NPLOC4-210ENST00000572824 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
NPLOC4-210ENST00000572824 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
NPLOC4-210ENST00000572824 MT1EP04732 61 aa3.46□□□□□ -1.86
NPLOC4-210ENST00000572824 ACYP2P14621 99 aa3.45□□□□□ -1.86
NPLOC4-210ENST00000572824 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
NPLOC4-210ENST00000572824 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
NPLOC4-210ENST00000572824 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
NPLOC4-210ENST00000572824 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
NPLOC4-210ENST00000572824 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
NPLOC4-210ENST00000572824 A0A0D9SG42 100 aa3.37□□□□□ -1.87
NPLOC4-210ENST00000572824 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
NPLOC4-210ENST00000572824 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
NPLOC4-210ENST00000572824 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
NPLOC4-210ENST00000572824 UQCR11O14957 56 aa3.33□□□□□ -1.88
NPLOC4-210ENST00000572824 MT4P47944 62 aa3.32□□□□□ -1.88
NPLOC4-210ENST00000572824 ROMO1P60602 79 aa3.32□□□□□ -1.88
NPLOC4-210ENST00000572824 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
NPLOC4-210ENST00000572824 MT1MQ8N339 61 aa3.31□□□□□ -1.88
NPLOC4-210ENST00000572824 A0A1B0GU69 56 aa3.29□□□□□ -1.88
NPLOC4-210ENST00000572824 KRTAP25-1Q3LHN0 102 aa3.29□□□□□ -1.88
NPLOC4-210ENST00000572824 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
NPLOC4-210ENST00000572824 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
NPLOC4-210ENST00000572824 MT1LQ93083 61 aa3.28□□□□□ -1.88
NPLOC4-210ENST00000572824 SPINT4Q6UDR6 99 aa3.27□□□□□ -1.89
NPLOC4-210ENST00000572824 MT1GP13640 62 aa3.26□□□□□ -1.89
NPLOC4-210ENST00000572824 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NPLOC4-210ENST00000572824 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
NPLOC4-210ENST00000572824 A0A1B0GU33 70 aa3.19□□□□□ -1.9
NPLOC4-210ENST00000572824 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
NPLOC4-210ENST00000572824 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
NPLOC4-210ENST00000572824 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
NPLOC4-210ENST00000572824 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
NPLOC4-210ENST00000572824 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
NPLOC4-210ENST00000572824 TNP1P09430 55 aa3.05□□□□□ -1.92
NPLOC4-210ENST00000572824 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
NPLOC4-210ENST00000572824 K7ERS5 55 aa3.04□□□□□ -1.92
NPLOC4-210ENST00000572824 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
NPLOC4-210ENST00000572824 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
NPLOC4-210ENST00000572824 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
NPLOC4-210ENST00000572824 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
NPLOC4-210ENST00000572824 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
NPLOC4-210ENST00000572824 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
NPLOC4-210ENST00000572824 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
NPLOC4-210ENST00000572824 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
NPLOC4-210ENST00000572824 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
NPLOC4-210ENST00000572824 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
NPLOC4-210ENST00000572824 MT1AP04731 61 aa2.76□□□□□ -1.97
NPLOC4-210ENST00000572824 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
NPLOC4-210ENST00000572824 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
NPLOC4-210ENST00000572824 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
NPLOC4-210ENST00000572824 INE1O15225 51 aa2.59□□□□□ -1.99
NPLOC4-210ENST00000572824 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
NPLOC4-210ENST00000572824 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
NPLOC4-210ENST00000572824 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
NPLOC4-210ENST00000572824 PRM1P04553 51 aa1.61□□□□□ -2.15
NPLOC4-210ENST00000572824 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
NPLOC4-210ENST00000572824 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 74.1 ms