RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 SERP2Q8N6R1 65 aa3.32□□□□□ -1.88
TRAPPC1-205ENST00000572656 TNP1P09430 55 aa3.31□□□□□ -1.88
TRAPPC1-205ENST00000572656 SVIPQ8NHG7 77 aa3.31□□□□□ -1.88
TRAPPC1-205ENST00000572656 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
TRAPPC1-205ENST00000572656 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
TRAPPC1-205ENST00000572656 SMIM26A0A096LP01 95 aa3.28□□□□□ -1.88
TRAPPC1-205ENST00000572656 ANAPC13Q9BS18 74 aa3.27□□□□□ -1.89
TRAPPC1-205ENST00000572656 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC1-205ENST00000572656 A8MU10 97 aa3.24□□□□□ -1.89
TRAPPC1-205ENST00000572656 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
TRAPPC1-205ENST00000572656 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
TRAPPC1-205ENST00000572656 COX7CP15954 63 aa3.22□□□□□ -1.89
TRAPPC1-205ENST00000572656 H7BZZ5 65 aa3.21□□□□□ -1.9
TRAPPC1-205ENST00000572656 A0A1B0GU69 56 aa3.2□□□□□ -1.9
TRAPPC1-205ENST00000572656 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
TRAPPC1-205ENST00000572656 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
TRAPPC1-205ENST00000572656 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
TRAPPC1-205ENST00000572656 CCDC179H3BU77 68 aa3.12□□□□□ -1.91
TRAPPC1-205ENST00000572656 TMEM258P61165 79 aa3.09□□□□□ -1.91
TRAPPC1-205ENST00000572656 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
TRAPPC1-205ENST00000572656 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
TRAPPC1-205ENST00000572656 PRR15LQ9BU68 103 aa3.04□□□□□ -1.92
TRAPPC1-205ENST00000572656 ATP5EP56381 51 aaPredicted RBP3.03□□□□□ -1.92
TRAPPC1-205ENST00000572656 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
TRAPPC1-205ENST00000572656 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
TRAPPC1-205ENST00000572656 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
TRAPPC1-205ENST00000572656 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
TRAPPC1-205ENST00000572656 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
TRAPPC1-205ENST00000572656 MT1AP04731 61 aa2.96□□□□□ -1.94
TRAPPC1-205ENST00000572656 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
TRAPPC1-205ENST00000572656 LCE3CQ5T5A8 94 aa2.96□□□□□ -1.94
TRAPPC1-205ENST00000572656 KRTAP15-1Q3LI76 137 aa2.95□□□□□ -1.94
TRAPPC1-205ENST00000572656 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
TRAPPC1-205ENST00000572656 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC1-205ENST00000572656 PRO0628Q9UI54 55 aa2.94□□□□□ -1.94
TRAPPC1-205ENST00000572656 UQCR11O14957 56 aa2.93□□□□□ -1.94
TRAPPC1-205ENST00000572656 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.95
TRAPPC1-205ENST00000572656 V9GYY9 64 aa2.9□□□□□ -1.95
TRAPPC1-205ENST00000572656 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
TRAPPC1-205ENST00000572656 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
TRAPPC1-205ENST00000572656 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
TRAPPC1-205ENST00000572656 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
TRAPPC1-205ENST00000572656 K7ERS5 55 aa2.84□□□□□ -1.95
TRAPPC1-205ENST00000572656 MIR22HGQ0VDD5 57 aa2.84□□□□□ -1.95
TRAPPC1-205ENST00000572656 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
TRAPPC1-205ENST00000572656 Q1T7F1 81 aa2.83□□□□□ -1.96
TRAPPC1-205ENST00000572656 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
TRAPPC1-205ENST00000572656 PSPHP1O15172 72 aa2.79□□□□□ -1.96
TRAPPC1-205ENST00000572656 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
TRAPPC1-205ENST00000572656 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
TRAPPC1-205ENST00000572656 MT3P25713 68 aa2.73□□□□□ -1.97
TRAPPC1-205ENST00000572656 A6NED7 52 aa2.7□□□□□ -1.98
TRAPPC1-205ENST00000572656 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
TRAPPC1-205ENST00000572656 CDC42SE1Q9NRR8 79 aa2.67□□□□□ -1.98
TRAPPC1-205ENST00000572656 ROMO1P60602 79 aa2.6□□□□□ -1.99
TRAPPC1-205ENST00000572656 LCE1EQ5T753 118 aa2.57□□□□□ -2
TRAPPC1-205ENST00000572656 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
TRAPPC1-205ENST00000572656 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
TRAPPC1-205ENST00000572656 PRAC1Q96KF2 57 aa2.41□□□□□ -2.02
TRAPPC1-205ENST00000572656 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
TRAPPC1-205ENST00000572656 H3BS24 57 aa2.32□□□□□ -2.04
TRAPPC1-205ENST00000572656 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
TRAPPC1-205ENST00000572656 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
TRAPPC1-205ENST00000572656 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
TRAPPC1-205ENST00000572656 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
TRAPPC1-205ENST00000572656 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
TRAPPC1-205ENST00000572656 LUZP6Q538Z0 58 aa2.12□□□□□ -2.07
TRAPPC1-205ENST00000572656 LCE3DQ9BYE3 92 aa2.09□□□□□ -2.07
TRAPPC1-205ENST00000572656 A0A0A0MQY5 61 aa2.07□□□□□ -2.08
TRAPPC1-205ENST00000572656 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
TRAPPC1-205ENST00000572656 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TRAPPC1-205ENST00000572656 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
TRAPPC1-205ENST00000572656 INE1O15225 51 aa1.86□□□□□ -2.11
TRAPPC1-205ENST00000572656 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
TRAPPC1-205ENST00000572656 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
TRAPPC1-205ENST00000572656 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
TRAPPC1-205ENST00000572656 PRM1P04553 51 aa1.34□□□□□ -2.19
TRAPPC1-205ENST00000572656 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 151.3 ms