RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
CHRNE-202ENST00000572438 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
CHRNE-202ENST00000572438 SPRR2FQ96RM1 72 aa7.23□□□□□ -1.25
CHRNE-202ENST00000572438 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
CHRNE-202ENST00000572438 LUZP6Q538Z0 58 aa7.17□□□□□ -1.26
CHRNE-202ENST00000572438 KRTAP19-3Q7Z4W3 81 aa7.13□□□□□ -1.27
CHRNE-202ENST00000572438 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
CHRNE-202ENST00000572438 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
CHRNE-202ENST00000572438 NDUFAF8A1L188 74 aa7.07□□□□□ -1.28
CHRNE-202ENST00000572438 MT1GP13640 62 aa7.07□□□□□ -1.28
CHRNE-202ENST00000572438 MT1MQ8N339 61 aa7□□□□□ -1.29
CHRNE-202ENST00000572438 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
CHRNE-202ENST00000572438 NEBP20929 6669 aa6.99□□□□□ -1.29
CHRNE-202ENST00000572438 SPRR2EP22531 72 aa6.97□□□□□ -1.29
CHRNE-202ENST00000572438 SPRR2BP35325 72 aa6.97□□□□□ -1.29
CHRNE-202ENST00000572438 SPRR2AP35326 72 aa6.97□□□□□ -1.29
CHRNE-202ENST00000572438 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
CHRNE-202ENST00000572438 KRTAP9-6A8MVA2 160 aa6.89□□□□□ -1.31
CHRNE-202ENST00000572438 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
CHRNE-202ENST00000572438 SPRR2DP22532 72 aa6.72□□□□□ -1.33
CHRNE-202ENST00000572438 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
CHRNE-202ENST00000572438 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
CHRNE-202ENST00000572438 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
CHRNE-202ENST00000572438 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.37
CHRNE-202ENST00000572438 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
CHRNE-202ENST00000572438 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
CHRNE-202ENST00000572438 KRTAP2-1Q9BYU5 128 aa6.39□□□□□ -1.39
CHRNE-202ENST00000572438 H3BS24 57 aa6.36□□□□□ -1.39
CHRNE-202ENST00000572438 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
CHRNE-202ENST00000572438 KRTAP5-5Q701N2 237 aaPredicted RBP6.3□□□□□ -1.4
CHRNE-202ENST00000572438 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
CHRNE-202ENST00000572438 MT1AP04731 61 aa6.2□□□□□ -1.42
CHRNE-202ENST00000572438 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.42
CHRNE-202ENST00000572438 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
CHRNE-202ENST00000572438 KRTAP5-4Q6L8H1 288 aa5.97□□□□□ -1.45
CHRNE-202ENST00000572438 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
CHRNE-202ENST00000572438 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
CHRNE-202ENST00000572438 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
CHRNE-202ENST00000572438 MT4P47944 62 aa5.87□□□□□ -1.47
CHRNE-202ENST00000572438 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
CHRNE-202ENST00000572438 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
CHRNE-202ENST00000572438 INE1O15225 51 aa5.82□□□□□ -1.48
CHRNE-202ENST00000572438 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
CHRNE-202ENST00000572438 HMCN1Q96RW7 5635 aa5.75□□□□□ -1.49
CHRNE-202ENST00000572438 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
CHRNE-202ENST00000572438 MT3P25713 68 aa5.62□□□□□ -1.51
CHRNE-202ENST00000572438 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
CHRNE-202ENST00000572438 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
CHRNE-202ENST00000572438 KRTAP5-2Q701N4 177 aa5.43□□□□□ -1.54
CHRNE-202ENST00000572438 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
CHRNE-202ENST00000572438 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
CHRNE-202ENST00000572438 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
CHRNE-202ENST00000572438 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
CHRNE-202ENST00000572438 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
CHRNE-202ENST00000572438 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
CHRNE-202ENST00000572438 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
CHRNE-202ENST00000572438 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
CHRNE-202ENST00000572438 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
CHRNE-202ENST00000572438 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
CHRNE-202ENST00000572438 PRM1P04553 51 aa4.69□□□□□ -1.66
CHRNE-202ENST00000572438 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
CHRNE-202ENST00000572438 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
CHRNE-202ENST00000572438 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
CHRNE-202ENST00000572438 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
CHRNE-202ENST00000572438 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
CHRNE-202ENST00000572438 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
CHRNE-202ENST00000572438 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
CHRNE-202ENST00000572438 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
CHRNE-202ENST00000572438 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
CHRNE-202ENST00000572438 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
CHRNE-202ENST00000572438 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
CHRNE-202ENST00000572438 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
CHRNE-202ENST00000572438 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
CHRNE-202ENST00000572438 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
CHRNE-202ENST00000572438 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
CHRNE-202ENST00000572438 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
CHRNE-202ENST00000572438 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CHRNE-202ENST00000572438 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 77.3 ms