RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TRIM25-205ENST00000572021 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
TRIM25-205ENST00000572021 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
TRIM25-205ENST00000572021 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
TRIM25-205ENST00000572021 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
TRIM25-205ENST00000572021 SPRR2DP22532 72 aa4.43□□□□□ -1.7
TRIM25-205ENST00000572021 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
TRIM25-205ENST00000572021 MT1EP04732 61 aa4.41□□□□□ -1.7
TRIM25-205ENST00000572021 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
TRIM25-205ENST00000572021 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
TRIM25-205ENST00000572021 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
TRIM25-205ENST00000572021 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
TRIM25-205ENST00000572021 LCE5AQ5TCM9 118 aa4.31□□□□□ -1.72
TRIM25-205ENST00000572021 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
TRIM25-205ENST00000572021 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
TRIM25-205ENST00000572021 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
TRIM25-205ENST00000572021 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
TRIM25-205ENST00000572021 KRTAP2-1Q9BYU5 128 aa4.26□□□□□ -1.73
TRIM25-205ENST00000572021 MT1LQ93083 61 aa4.25□□□□□ -1.73
TRIM25-205ENST00000572021 MT1GP13640 62 aa4.23□□□□□ -1.73
TRIM25-205ENST00000572021 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
TRIM25-205ENST00000572021 MT1MQ8N339 61 aa4.19□□□□□ -1.74
TRIM25-205ENST00000572021 NDUFAF8A1L188 74 aa4.18□□□□□ -1.74
TRIM25-205ENST00000572021 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
TRIM25-205ENST00000572021 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
TRIM25-205ENST00000572021 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
TRIM25-205ENST00000572021 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
TRIM25-205ENST00000572021 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
TRIM25-205ENST00000572021 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
TRIM25-205ENST00000572021 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
TRIM25-205ENST00000572021 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
TRIM25-205ENST00000572021 MT4P47944 62 aa3.89□□□□□ -1.79
TRIM25-205ENST00000572021 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
TRIM25-205ENST00000572021 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
TRIM25-205ENST00000572021 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
TRIM25-205ENST00000572021 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
TRIM25-205ENST00000572021 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
TRIM25-205ENST00000572021 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
TRIM25-205ENST00000572021 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
TRIM25-205ENST00000572021 KRTAP12-4P60329 112 aa3.65□□□□□ -1.82
TRIM25-205ENST00000572021 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.82
TRIM25-205ENST00000572021 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
TRIM25-205ENST00000572021 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
TRIM25-205ENST00000572021 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
TRIM25-205ENST00000572021 MT1AP04731 61 aa3.6□□□□□ -1.83
TRIM25-205ENST00000572021 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
TRIM25-205ENST00000572021 INE1O15225 51 aa3.51□□□□□ -1.85
TRIM25-205ENST00000572021 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
TRIM25-205ENST00000572021 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.85
TRIM25-205ENST00000572021 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
TRIM25-205ENST00000572021 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
TRIM25-205ENST00000572021 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
TRIM25-205ENST00000572021 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
TRIM25-205ENST00000572021 KRTAP5-7Q6L8G8 165 aa3.3□□□□□ -1.88
TRIM25-205ENST00000572021 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
TRIM25-205ENST00000572021 MT3P25713 68 aa3.27□□□□□ -1.89
TRIM25-205ENST00000572021 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
TRIM25-205ENST00000572021 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
TRIM25-205ENST00000572021 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
TRIM25-205ENST00000572021 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
TRIM25-205ENST00000572021 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
TRIM25-205ENST00000572021 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
TRIM25-205ENST00000572021 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
TRIM25-205ENST00000572021 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
TRIM25-205ENST00000572021 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
TRIM25-205ENST00000572021 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
TRIM25-205ENST00000572021 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
TRIM25-205ENST00000572021 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
TRIM25-205ENST00000572021 PRM1P04553 51 aa2.67□□□□□ -1.98
TRIM25-205ENST00000572021 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
TRIM25-205ENST00000572021 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
TRIM25-205ENST00000572021 LCE1FQ5T754 118 aa2.4□□□□□ -2.02
TRIM25-205ENST00000572021 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
TRIM25-205ENST00000572021 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
TRIM25-205ENST00000572021 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
TRIM25-205ENST00000572021 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
TRIM25-205ENST00000572021 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
TRIM25-205ENST00000572021 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms