RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 A8MU10 97 aa5.92□□□□□ -1.46
RAB40B-205ENST00000571880 MT4P47944 62 aa5.91□□□□□ -1.46
RAB40B-205ENST00000571880 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
RAB40B-205ENST00000571880 MT1LQ93083 61 aa5.9□□□□□ -1.46
RAB40B-205ENST00000571880 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
RAB40B-205ENST00000571880 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
RAB40B-205ENST00000571880 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
RAB40B-205ENST00000571880 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
RAB40B-205ENST00000571880 A0A1B0GU69 56 aa5.85□□□□□ -1.47
RAB40B-205ENST00000571880 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
RAB40B-205ENST00000571880 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
RAB40B-205ENST00000571880 HMCN1Q96RW7 5635 aa5.84□□□□□ -1.47
RAB40B-205ENST00000571880 SMIM26A0A096LP01 95 aa5.82□□□□□ -1.48
RAB40B-205ENST00000571880 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
RAB40B-205ENST00000571880 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
RAB40B-205ENST00000571880 TNP1P09430 55 aa5.75□□□□□ -1.49
RAB40B-205ENST00000571880 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
RAB40B-205ENST00000571880 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
RAB40B-205ENST00000571880 KRTAP5-4Q6L8H1 288 aa5.68□□□□□ -1.5
RAB40B-205ENST00000571880 V9GYY9 64 aa5.62□□□□□ -1.51
RAB40B-205ENST00000571880 Q1T7F1 81 aa5.61□□□□□ -1.51
RAB40B-205ENST00000571880 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
RAB40B-205ENST00000571880 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
RAB40B-205ENST00000571880 KRTAP5-10Q6L8G5 202 aa5.57□□□□□ -1.52
RAB40B-205ENST00000571880 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
RAB40B-205ENST00000571880 PSPHP1O15172 72 aa5.43□□□□□ -1.54
RAB40B-205ENST00000571880 KRTAP20-2Q3LI61 65 aa5.42□□□□□ -1.54
RAB40B-205ENST00000571880 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
RAB40B-205ENST00000571880 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
RAB40B-205ENST00000571880 UQCR11O14957 56 aa5.38□□□□□ -1.55
RAB40B-205ENST00000571880 PRAC1Q96KF2 57 aa5.38□□□□□ -1.55
RAB40B-205ENST00000571880 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
RAB40B-205ENST00000571880 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
RAB40B-205ENST00000571880 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
RAB40B-205ENST00000571880 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
RAB40B-205ENST00000571880 A6NED7 52 aa5.3□□□□□ -1.56
RAB40B-205ENST00000571880 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
RAB40B-205ENST00000571880 MIR22HGQ0VDD5 57 aa5.29□□□□□ -1.56
RAB40B-205ENST00000571880 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
RAB40B-205ENST00000571880 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
RAB40B-205ENST00000571880 KRTAP4-11Q9BYQ6 195 aa5.21□□□□□ -1.58
RAB40B-205ENST00000571880 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
RAB40B-205ENST00000571880 K7ERS5 55 aa5.17□□□□□ -1.58
RAB40B-205ENST00000571880 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
RAB40B-205ENST00000571880 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
RAB40B-205ENST00000571880 KRTAP6-1Q3LI64 71 aa5.03□□□□□ -1.6
RAB40B-205ENST00000571880 MT1AP04731 61 aa5□□□□□ -1.61
RAB40B-205ENST00000571880 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
RAB40B-205ENST00000571880 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
RAB40B-205ENST00000571880 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
RAB40B-205ENST00000571880 NDUFAF8A1L188 74 aa4.87□□□□□ -1.63
RAB40B-205ENST00000571880 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
RAB40B-205ENST00000571880 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
RAB40B-205ENST00000571880 ROMO1P60602 79 aa4.82□□□□□ -1.64
RAB40B-205ENST00000571880 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
RAB40B-205ENST00000571880 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
RAB40B-205ENST00000571880 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
RAB40B-205ENST00000571880 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
RAB40B-205ENST00000571880 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
RAB40B-205ENST00000571880 MT3P25713 68 aa4.54□□□□□ -1.68
RAB40B-205ENST00000571880 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
RAB40B-205ENST00000571880 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
RAB40B-205ENST00000571880 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
RAB40B-205ENST00000571880 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
RAB40B-205ENST00000571880 LUZP6Q538Z0 58 aa4□□□□□ -1.77
RAB40B-205ENST00000571880 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
RAB40B-205ENST00000571880 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
RAB40B-205ENST00000571880 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
RAB40B-205ENST00000571880 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
RAB40B-205ENST00000571880 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
RAB40B-205ENST00000571880 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
RAB40B-205ENST00000571880 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
RAB40B-205ENST00000571880 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
RAB40B-205ENST00000571880 INE1O15225 51 aa3.06□□□□□ -1.92
RAB40B-205ENST00000571880 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
RAB40B-205ENST00000571880 PRM1P04553 51 aa2.52□□□□□ -2.01
RAB40B-205ENST00000571880 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
RAB40B-205ENST00000571880 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 69.7 ms