RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 COX6B2Q6YFQ2 88 aa1.6□□□□□ -2.15
CDC27-213ENST00000571643 WFDC13Q8IUB5 93 aa1.6□□□□□ -2.15
CDC27-213ENST00000571643 MRPL34Q9BQ48 92 aaKnown RBP1.6□□□□□ -2.15
CDC27-213ENST00000571643 FAT4Q6V0I7 4981 aa1.59□□□□□ -2.15
CDC27-213ENST00000571643 MUC17Q685J3 4493 aa1.59□□□□□ -2.15
CDC27-213ENST00000571643 MUC2Q02817 5179 aa1.59□□□□□ -2.15
CDC27-213ENST00000571643 TP53AIP1Q9HCN2 124 aa1.59□□□□□ -2.15
CDC27-213ENST00000571643 MMP24-AS1A0A0U1RRL7 71 aa1.58□□□□□ -2.16
CDC27-213ENST00000571643 K7EQZ3 153 aa1.58□□□□□ -2.16
CDC27-213ENST00000571643 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
CDC27-213ENST00000571643 MT1HP80294 61 aa1.58□□□□□ -2.16
CDC27-213ENST00000571643 M0R2T5 61 aa1.56□□□□□ -2.16
CDC27-213ENST00000571643 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
CDC27-213ENST00000571643 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
CDC27-213ENST00000571643 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
CDC27-213ENST00000571643 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
CDC27-213ENST00000571643 MT2AP02795 61 aa1.48□□□□□ -2.17
CDC27-213ENST00000571643 CRIPTQ9P021 101 aa1.48□□□□□ -2.17
CDC27-213ENST00000571643 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
CDC27-213ENST00000571643 S4R3F8 94 aa1.47□□□□□ -2.17
CDC27-213ENST00000571643 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
CDC27-213ENST00000571643 H0YAA0 97 aa1.46□□□□□ -2.18
CDC27-213ENST00000571643 MT1FP04733 61 aa1.46□□□□□ -2.18
CDC27-213ENST00000571643 SPRR2GQ9BYE4 73 aa1.42□□□□□ -2.18
CDC27-213ENST00000571643 KRTAP19-8Q3LI54 63 aa1.41□□□□□ -2.18
CDC27-213ENST00000571643 KRTAP19-6Q3LI70 58 aa1.41□□□□□ -2.18
CDC27-213ENST00000571643 USH2AO75445 5202 aa1.39□□□□□ -2.19
CDC27-213ENST00000571643 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
CDC27-213ENST00000571643 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
CDC27-213ENST00000571643 M0QZ58 72 aa1.36□□□□□ -2.19
CDC27-213ENST00000571643 MT1BP07438 61 aa1.36□□□□□ -2.19
CDC27-213ENST00000571643 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
CDC27-213ENST00000571643 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
CDC27-213ENST00000571643 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
CDC27-213ENST00000571643 C10orf95Q9H7T3 257 aa1.32□□□□□ -2.2
CDC27-213ENST00000571643 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
CDC27-213ENST00000571643 MT1XP80297 61 aa1.29□□□□□ -2.2
CDC27-213ENST00000571643 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
CDC27-213ENST00000571643 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
CDC27-213ENST00000571643 NEBP20929 6669 aa1.22□□□□□ -2.21
CDC27-213ENST00000571643 A0A0D9SG42 100 aa1.22□□□□□ -2.21
CDC27-213ENST00000571643 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
CDC27-213ENST00000571643 KMT2DO14686 5537 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 TNP1P09430 55 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 KRTAP2-3P0C7H8 128 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 SPRR2EP22531 72 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 SPRR2BP35325 72 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 SPRR2AP35326 72 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 KRTAP2-4Q9BYR9 128 aa1.19□□□□□ -2.22
CDC27-213ENST00000571643 KRTAP20-1Q3LI63 56 aa1.18□□□□□ -2.22
CDC27-213ENST00000571643 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
CDC27-213ENST00000571643 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
CDC27-213ENST00000571643 MT1GP13640 62 aa1.15□□□□□ -2.23
CDC27-213ENST00000571643 SPRR2DP22532 72 aa1.15□□□□□ -2.23
CDC27-213ENST00000571643 KRTAP19-7Q3SYF9 63 aa1.15□□□□□ -2.23
CDC27-213ENST00000571643 MDN1Q9NU22 5596 aa1.14□□□□□ -2.23
CDC27-213ENST00000571643 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
CDC27-213ENST00000571643 MT1EP04732 61 aa1.13□□□□□ -2.23
CDC27-213ENST00000571643 KRTAP19-5Q3LI72 72 aa1.12□□□□□ -2.23
CDC27-213ENST00000571643 MT1LQ93083 61 aa1.09□□□□□ -2.23
CDC27-213ENST00000571643 MT1MQ8N339 61 aa1.08□□□□□ -2.24
CDC27-213ENST00000571643 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.24
CDC27-213ENST00000571643 GPR98Q8WXG9 6306 aa0.97□□□□□ -2.25
CDC27-213ENST00000571643 MT4P47944 62 aa0.97□□□□□ -2.25
CDC27-213ENST00000571643 MT1AP04731 61 aa0.95□□□□□ -2.26
CDC27-213ENST00000571643 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
CDC27-213ENST00000571643 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
CDC27-213ENST00000571643 AHNAK2Q8IVF2 5795 aa0.92□□□□□ -2.26
CDC27-213ENST00000571643 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
CDC27-213ENST00000571643 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
CDC27-213ENST00000571643 KRTAP6-2Q3LI66 62 aa0.86□□□□□ -2.27
CDC27-213ENST00000571643 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CDC27-213ENST00000571643 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
CDC27-213ENST00000571643 PRM1P04553 51 aa0.78□□□□□ -2.28
CDC27-213ENST00000571643 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
CDC27-213ENST00000571643 MUC5BQ9HC84 5762 aaPredicted RBP0.73□□□□□ -2.29
CDC27-213ENST00000571643 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
CDC27-213ENST00000571643 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 160.8 ms