RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CDRT1-206ENST00000571263 KRTAP19-7Q3SYF9 63 aa4.41□□□□□ -1.7
CDRT1-206ENST00000571263 SPRR2FQ96RM1 72 aa4.4□□□□□ -1.71
CDRT1-206ENST00000571263 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
CDRT1-206ENST00000571263 KMT2DO14686 5537 aa4.36□□□□□ -1.71
CDRT1-206ENST00000571263 MT1EP04732 61 aa4.36□□□□□ -1.71
CDRT1-206ENST00000571263 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
CDRT1-206ENST00000571263 MT1GP13640 62 aa4.25□□□□□ -1.73
CDRT1-206ENST00000571263 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
CDRT1-206ENST00000571263 MT1LQ93083 61 aa4.25□□□□□ -1.73
CDRT1-206ENST00000571263 NEBP20929 6669 aa4.23□□□□□ -1.73
CDRT1-206ENST00000571263 SPRR2EP22531 72 aa4.22□□□□□ -1.73
CDRT1-206ENST00000571263 SPRR2BP35325 72 aa4.22□□□□□ -1.73
CDRT1-206ENST00000571263 SPRR2AP35326 72 aa4.22□□□□□ -1.73
CDRT1-206ENST00000571263 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
CDRT1-206ENST00000571263 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
CDRT1-206ENST00000571263 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
CDRT1-206ENST00000571263 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
CDRT1-206ENST00000571263 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
CDRT1-206ENST00000571263 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CDRT1-206ENST00000571263 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CDRT1-206ENST00000571263 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
CDRT1-206ENST00000571263 SPRR2DP22532 72 aa4.08□□□□□ -1.76
CDRT1-206ENST00000571263 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
CDRT1-206ENST00000571263 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
CDRT1-206ENST00000571263 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
CDRT1-206ENST00000571263 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
CDRT1-206ENST00000571263 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
CDRT1-206ENST00000571263 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
CDRT1-206ENST00000571263 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
CDRT1-206ENST00000571263 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
CDRT1-206ENST00000571263 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
CDRT1-206ENST00000571263 INE1O15225 51 aa3.87□□□□□ -1.79
CDRT1-206ENST00000571263 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
CDRT1-206ENST00000571263 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
CDRT1-206ENST00000571263 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
CDRT1-206ENST00000571263 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
CDRT1-206ENST00000571263 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
CDRT1-206ENST00000571263 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
CDRT1-206ENST00000571263 MT1AP04731 61 aa3.64□□□□□ -1.83
CDRT1-206ENST00000571263 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
CDRT1-206ENST00000571263 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
CDRT1-206ENST00000571263 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
CDRT1-206ENST00000571263 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
CDRT1-206ENST00000571263 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CDRT1-206ENST00000571263 MT4P47944 62 aa3.5□□□□□ -1.85
CDRT1-206ENST00000571263 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CDRT1-206ENST00000571263 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
CDRT1-206ENST00000571263 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
CDRT1-206ENST00000571263 MT3P25713 68 aa3.35□□□□□ -1.87
CDRT1-206ENST00000571263 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
CDRT1-206ENST00000571263 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
CDRT1-206ENST00000571263 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
CDRT1-206ENST00000571263 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
CDRT1-206ENST00000571263 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
CDRT1-206ENST00000571263 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
CDRT1-206ENST00000571263 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
CDRT1-206ENST00000571263 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
CDRT1-206ENST00000571263 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
CDRT1-206ENST00000571263 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
CDRT1-206ENST00000571263 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
CDRT1-206ENST00000571263 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
CDRT1-206ENST00000571263 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
CDRT1-206ENST00000571263 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
CDRT1-206ENST00000571263 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
CDRT1-206ENST00000571263 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
CDRT1-206ENST00000571263 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
CDRT1-206ENST00000571263 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
CDRT1-206ENST00000571263 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
CDRT1-206ENST00000571263 PRM1P04553 51 aa2.48□□□□□ -2.01
CDRT1-206ENST00000571263 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
CDRT1-206ENST00000571263 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
CDRT1-206ENST00000571263 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
CDRT1-206ENST00000571263 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
CDRT1-206ENST00000571263 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
CDRT1-206ENST00000571263 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CDRT1-206ENST00000571263 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CDRT1-206ENST00000571263 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 51.9 ms